RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 TBC1D7Q9P0N9 293 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 USP36Q9P275 1121 aaKnown RBP13.33□□□□□ -0.28
PSEN1-221ENST00000557293 FBXO10Q9UK96 956 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 PCDHGB2Q9Y5G2 931 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 SLCO1B1Q9Y6L6 691 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 FAM92AA1XBS5 289 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 METTL12A8MUP2 240 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 TK2O00142 265 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 GFRA2O00451 464 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 CACNG3O60359 315 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 TACC1O75410 805 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 FAM163BP0C2L3 166 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 TMEM191BP0C7N4 346 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 ITPKBP27987 946 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 IFRD2Q12894 506 aaPredicted RBP13.32□□□□□ -0.28
PSEN1-221ENST00000557293 MYO1EQ12965 1108 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 PREPLQ4J6C6 727 aaPredicted RBP13.32□□□□□ -0.28
PSEN1-221ENST00000557293 HECTD3Q5T447 861 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 MCTP1Q6DN14 999 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 NUDT18Q6ZVK8 323 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 HS2ST1Q7LGA3 356 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 NUP93Q8N1F7 819 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 ZCCHC9Q8N567 271 aaKnown RBP13.32□□□□□ -0.28
PSEN1-221ENST00000557293 KRI1Q8N9T8 703 aaKnown RBP13.32□□□□□ -0.28
PSEN1-221ENST00000557293 CADM4Q8NFZ8 388 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 RHBDD1Q8TEB9 315 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 OVCA2Q8WZ82 227 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 SLC39A7Q92504 469 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 KIF2CQ99661 725 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 GPR174Q9BXC1 333 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 MKRN2Q9H000 416 aaKnown RBP13.32□□□□□ -0.28
PSEN1-221ENST00000557293 PRORYQ9H606 182 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 DNAJC17Q9NVM6 304 aaKnown RBP13.32□□□□□ -0.28
PSEN1-221ENST00000557293 SH3BP1Q9Y3L3 701 aa13.32□□□□□ -0.28
PSEN1-221ENST00000557293 CABIN1Q9Y6J0 2220 aa13.31□□□□□ -0.28
PSEN1-221ENST00000557293 ATXN7O15265 892 aaPredicted RBP13.31□□□□□ -0.28
PSEN1-221ENST00000557293 NCAM1P13591 858 aa13.31□□□□□ -0.28
PSEN1-221ENST00000557293 TYRP14679 529 aa13.31□□□□□ -0.28
PSEN1-221ENST00000557293 MATKP42679 507 aa13.31□□□□□ -0.28
PSEN1-221ENST00000557293 ENPP2Q13822 863 aa13.31□□□□□ -0.28
PSEN1-221ENST00000557293 SMAD1Q15797 465 aaKnown RBP13.31□□□□□ -0.28
PSEN1-221ENST00000557293 PTPRNQ16849 979 aa13.31□□□□□ -0.28
PSEN1-221ENST00000557293 FUT11Q495W5 492 aa13.31□□□□□ -0.28
PSEN1-221ENST00000557293 SDE2Q6IQ49 451 aa13.31□□□□□ -0.28
PSEN1-221ENST00000557293 KIAA1324Q6UXG2 1013 aaKnown RBP13.31□□□□□ -0.28
PSEN1-221ENST00000557293 PDCD7Q8N8D1 485 aaKnown RBP13.31□□□□□ -0.28
PSEN1-221ENST00000557293 PDZD8Q8NEN9 1154 aa13.31□□□□□ -0.28
PSEN1-221ENST00000557293 FBXO32Q969P5 355 aa13.31□□□□□ -0.28
PSEN1-221ENST00000557293 ANKRD36BP1Q96IX9 119 aa13.31□□□□□ -0.28
PSEN1-221ENST00000557293 CDC6Q99741 560 aa13.31□□□□□ -0.28
PSEN1-221ENST00000557293 KLF16Q9BXK1 252 aaPredicted RBP13.31□□□□□ -0.28
PSEN1-221ENST00000557293 MRPL44Q9H9J2 332 aaKnown RBP13.31□□□□□ -0.28
PSEN1-221ENST00000557293 MARK1Q9P0L2 795 aa13.31□□□□□ -0.28
PSEN1-221ENST00000557293 SEL1LQ9UBV2 794 aa13.31□□□□□ -0.28
PSEN1-221ENST00000557293 EXOC7Q9UPT5 735 aa13.31□□□□□ -0.28
PSEN1-221ENST00000557293 RAI2Q9Y5P3 530 aa13.31□□□□□ -0.28
PSEN1-221ENST00000557293 KNTC1P50748 2209 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 A0A1B0GVT2 93 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 GOLGA8CPA6NN73 597 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 BCAT2O15382 392 aaPredicted RBP13.3□□□□□ -0.28
PSEN1-221ENST00000557293 FLRT2O43155 660 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 ZBTB24O43167 697 aaPredicted RBP13.3□□□□□ -0.28
PSEN1-221ENST00000557293 RTN3O95197 1032 aaPredicted RBP13.3□□□□□ -0.28
PSEN1-221ENST00000557293 TBX18O95935 607 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 PLA2G2AP14555 144 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 ACO1P21399 889 aaKnown RBP13.3□□□□□ -0.28
PSEN1-221ENST00000557293 LONP1P36776 959 aaKnown RBP13.3□□□□□ -0.28
PSEN1-221ENST00000557293 TUBP50607 506 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 DCAF12L1Q5VU92 463 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 TRAPPC11Q7Z392 1133 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 CBWD2Q8IUF1 395 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 GPD1LQ8N335 351 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 GALNT15Q8N3T1 639 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 SPRYD3Q8NCJ5 442 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 EPSTI1Q96J88 318 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 MMS19Q96T76 1030 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 BBS2Q9BXC9 721 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 ELOVL4Q9GZR5 314 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 MIR1-1HGQ9H1L0 117 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 SNX25Q9H3E2 840 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 GMIPQ9P107 970 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 EIF2B4Q9UI10 523 aaKnown RBP13.3□□□□□ -0.28
PSEN1-221ENST00000557293 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.3□□□□□ -0.28
PSEN1-221ENST00000557293 STON1Q9Y6Q2 735 aa13.3□□□□□ -0.28
PSEN1-221ENST00000557293 MEI4A8MW99 385 aa13.29□□□□□ -0.28
PSEN1-221ENST00000557293 NEDD8-MDP1E9PL57 170 aa13.29□□□□□ -0.28
PSEN1-221ENST00000557293 CER1O95813 267 aa13.29□□□□□ -0.28
PSEN1-221ENST00000557293 IGLV3-19P01714 112 aa13.29□□□□□ -0.28
PSEN1-221ENST00000557293 IRF1P10914 325 aa13.29□□□□□ -0.28
PSEN1-221ENST00000557293 CSNK1EP49674 416 aaKnown RBP13.29□□□□□ -0.28
PSEN1-221ENST00000557293 TPMTP51580 245 aa13.29□□□□□ -0.28
PSEN1-221ENST00000557293 DUOXA2Q1HG44 320 aa13.29□□□□□ -0.28
PSEN1-221ENST00000557293 PCSK4Q6UW60 755 aa13.29□□□□□ -0.28
PSEN1-221ENST00000557293 TPGS1Q6ZTW0 290 aa13.29□□□□□ -0.28
PSEN1-221ENST00000557293 ZMIZ2Q8NF64 920 aa13.29□□□□□ -0.28
PSEN1-221ENST00000557293 OR6B3Q8NGW1 331 aa13.29□□□□□ -0.28
PSEN1-221ENST00000557293 PIP4K2CQ8TBX8 421 aa13.29□□□□□ -0.28
PSEN1-221ENST00000557293 SCFD1Q8WVM8 642 aa13.29□□□□□ -0.28
PSEN1-221ENST00000557293 GZF1Q9H116 711 aaPredicted RBP13.29□□□□□ -0.28
PSEN1-221ENST00000557293 OLFML3Q9NRN5 406 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms