RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 KHDRBS3O75525 346 aaKnown RBP9.09□□□□□ -0.96
SYNE3-205ENST00000557275 ARF4P18085 180 aaPredicted RBP9.09□□□□□ -0.96
SYNE3-205ENST00000557275 ACTR3P61158 418 aa9.09□□□□□ -0.96
SYNE3-205ENST00000557275 IL5RAQ01344 420 aa9.09□□□□□ -0.96
SYNE3-205ENST00000557275 DCAF6Q58WW2 860 aa9.09□□□□□ -0.96
SYNE3-205ENST00000557275 C11orf57Q6ZUT1 292 aaPredicted RBP9.09□□□□□ -0.96
SYNE3-205ENST00000557275 ZNF248Q8NDW4 579 aa9.09□□□□□ -0.96
SYNE3-205ENST00000557275 HDAC7Q8WUI4 952 aa9.09□□□□□ -0.96
SYNE3-205ENST00000557275 PBRM1Q86U86 1689 aa9.09□□□□□ -0.96
SYNE3-205ENST00000557275 TCN1P20061 433 aaPredicted RBP9.08□□□□□ -0.96
SYNE3-205ENST00000557275 MYL9P24844 172 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 DRAP1Q14919 205 aaPredicted RBP9.08□□□□□ -0.96
SYNE3-205ENST00000557275 POLD3Q15054 466 aaPredicted RBP9.08□□□□□ -0.96
SYNE3-205ENST00000557275 MARK2Q7KZI7 788 aaKnown RBP9.08□□□□□ -0.96
SYNE3-205ENST00000557275 BTG4Q9NY30 223 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 MARK1Q9P0L2 795 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 RPS6KA6Q9UK32 745 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 CRYL1Q9Y2S2 319 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 hCG_1642624A0A1W2PR95 340 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 CYP2C8P10632 490 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 ADD1P35611 737 aaKnown RBP9.08□□□□□ -0.96
SYNE3-205ENST00000557275 RFX8Q6ZV50 586 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 MAGEE2Q8TD90 523 aaPredicted RBP9.08□□□□□ -0.96
SYNE3-205ENST00000557275 CNOT7Q9UIV1 285 aaKnown RBP9.08□□□□□ -0.96
SYNE3-205ENST00000557275 SLC39A10Q9ULF5 831 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 GRIN2AQ12879 1464 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 STK25O00506 426 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 BROXQ5VW32 411 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 NMD3Q96D46 503 aaKnown RBP9.08□□□□□ -0.96
SYNE3-205ENST00000557275 ERGIC3Q9Y282 383 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 ANKRD26P1Q6NSI1 321 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 RAB11FIP2Q7L804 512 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 MEIOBQ8N635 442 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 CLIC6Q96NY7 704 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 APOL3O95236 402 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 TGM2P21980 687 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 HARS2P49590 506 aaKnown RBP9.08□□□□□ -0.96
SYNE3-205ENST00000557275 ARPP19P56211 112 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 TCEA2Q15560 299 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 EPC2Q52LR7 807 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 UTS2BQ765I0 119 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 UCMAQ8WVF2 138 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 TMEM216Q9P0N5 145 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 C3orf18Q9UK00 162 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 KCNIP3Q9Y2W7 256 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 ZNF682O95780 498 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 PTGER2P43116 358 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 TFB1MQ8WVM0 346 aaKnown RBP9.08□□□□□ -0.96
SYNE3-205ENST00000557275 STAP2Q9UGK3 403 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 JAG2Q9Y219 1238 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 LBPP18428 481 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 GP5P40197 560 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 VAC14Q08AM6 782 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 LRRC14Q15048 493 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 BNIPLQ7Z465 357 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 MUC3BQ9H195 1237 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 CAB39LQ9H9S4 337 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 ZMYM1Q5SVZ6 1142 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 CHSY1Q86X52 802 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 C11orf70Q9BRQ4 267 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 PHF20Q9BVI0 1012 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 ADGRE3Q9BY15 652 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 RASSF1Q9NS23 344 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 ERCC2P18074 760 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 PRR23CQ6ZRP0 262 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 HINFPQ9BQA5 517 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 ERP44Q9BS26 406 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 RBAKQ9NYW8 714 aaPredicted RBP9.08□□□□□ -0.96
SYNE3-205ENST00000557275 GMIPQ9P107 970 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 SHANK2Q9UPX8 1470 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 CHI3L2Q15782 390 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 PPM1LQ5SGD2 360 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 ZNF772Q68DY9 489 aaPredicted RBP9.08□□□□□ -0.96
SYNE3-205ENST00000557275 LRRC69Q6ZNQ3 347 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 FAM81AQ8TBF8 368 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 SAR1AQ9NR31 198 aa9.08□□□□□ -0.96
SYNE3-205ENST00000557275 PDXKO00764 312 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 RGS14O43566 566 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 MED24O75448 989 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 RARBP10826 455 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 ILF3Q12906 894 aaKnown RBP eCLIP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 TAF13Q15543 124 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 SLC15A2Q16348 729 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 SLC27A3Q5K4L6 730 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 MAGEC3Q8TD91 643 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 PLGRKTQ9HBL7 147 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 HOXC10Q9NYD6 342 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 APEX2Q9UBZ4 518 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 RNASEH1O60930 286 aaKnown RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 ASMTLO95671 621 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 BTDP43251 543 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 CDC42P60953 191 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 SSTP61278 116 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 CCNIQ14094 377 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 MPP2Q14168 576 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 FAM189A2Q15884 450 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 OSBPL3Q9H4L5 887 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 XKR8Q9H6D3 395 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 RRN3Q9NYV6 651 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 MARCOQ9UEW3 520 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms