RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 FAM35AQ86V20 835 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 NAXDQ8IW45 347 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 PDILTQ8N807 584 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 ADAMTS14Q8WXS8 1223 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 ZNF516Q92618 1163 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 FOXJ1Q92949 421 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 GABRG3Q99928 467 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 BBS2Q9BXC9 721 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 DMAP1Q9NPF5 467 aaPredicted RBP13.03□□□□□ -0.32
SNX6-209ENST00000557265 CD93Q9NPY3 652 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 AGPAT3Q9NRZ7 376 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 SUSD2Q9UGT4 822 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 RAD54BQ9Y620 910 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 ATP8B3O60423 1300 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 PTPRDP23468 1912 aa13.02□□□□□ -0.32
SNX6-209ENST00000557265 PRRT4C9JH25 899 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 TGFB1I1O43294 461 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 GREM1O60565 184 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 STAU1O95793 577 aaKnown RBP13.02□□□□□ -0.33
SNX6-209ENST00000557265 TBX18O95935 607 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 TYRP14679 529 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 GNSP15586 552 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 CYP2J2P51589 502 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 CDH8P55286 799 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 CYP24A1Q07973 514 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 WDR45BQ5MNZ6 344 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 CCNI2Q6ZMN8 369 aaPredicted RBP13.02□□□□□ -0.33
SNX6-209ENST00000557265 TPGS1Q6ZTW0 290 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 SPRYD3Q8NCJ5 442 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 SCFD1Q8WVM8 642 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 MRGPRX1Q96LB2 322 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 XPO6Q96QU8 1125 aaKnown RBP13.02□□□□□ -0.33
SNX6-209ENST00000557265 TRIM9Q9C026 710 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 XYLT2Q9H1B5 865 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 CCDC86Q9H6F5 360 aaKnown RBP13.02□□□□□ -0.33
SNX6-209ENST00000557265 SMYD3Q9H7B4 428 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 CACNA2D2Q9NY47 1150 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 WDR35Q9P2L0 1181 aa13.02□□□□□ -0.33
SNX6-209ENST00000557265 LAMA5O15230 3695 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 FAM92AA1XBS5 289 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 WASH3PC4AMC7 463 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 CLIC2O15247 247 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 CACNG3O60359 315 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 TLR5O60602 858 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 PHACTR2O75167 634 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 AP1G2O75843 785 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 CLSTN1O94985 981 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 ATICP31939 592 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 GRIK2Q13002 908 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 COL28A1Q2UY09 1125 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 SOWAHCQ53LP3 525 aaPredicted RBP13.01□□□□□ -0.33
SNX6-209ENST00000557265 ERICH6BQ5W0A0 696 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 KIAA1324Q6UXG2 1013 aaKnown RBP13.01□□□□□ -0.33
SNX6-209ENST00000557265 PDZD3Q86UT5 571 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 FUKQ8N0W3 1084 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 XXYLT1Q8NBI6 393 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 ZNF507Q8TCN5 953 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 SYAP1Q96A49 352 aaPredicted RBP13.01□□□□□ -0.33
SNX6-209ENST00000557265 SMARCD1Q96GM5 515 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 KLF16Q9BXK1 252 aaPredicted RBP13.01□□□□□ -0.33
SNX6-209ENST00000557265 GZF1Q9H116 711 aaPredicted RBP13.01□□□□□ -0.33
SNX6-209ENST00000557265 KRT82Q9NSB4 513 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 COMMD8Q9NX08 183 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 MARK1Q9P0L2 795 aa13.01□□□□□ -0.33
SNX6-209ENST00000557265 APOBEC2Q9Y235 224 aaKnown RBP13.01□□□□□ -0.33
SNX6-209ENST00000557265 FREM2Q5SZK8 3169 aa13□□□□□ -0.33
SNX6-209ENST00000557265 NBEAQ8NFP9 2946 aa13□□□□□ -0.33
SNX6-209ENST00000557265 PI4KAP42356 2102 aa13□□□□□ -0.33
SNX6-209ENST00000557265 GFRA2O00451 464 aa13□□□□□ -0.33
SNX6-209ENST00000557265 EIF3DO15371 548 aaKnown RBP eCLIP13□□□□□ -0.33
SNX6-209ENST00000557265 BEST1O76090 585 aa13□□□□□ -0.33
SNX6-209ENST00000557265 CISD3P0C7P0 127 aa13□□□□□ -0.33
SNX6-209ENST00000557265 CD6P30203 668 aa13□□□□□ -0.33
SNX6-209ENST00000557265 DGKGP49619 791 aa13□□□□□ -0.33
SNX6-209ENST00000557265 SCARA5Q6ZMJ2 495 aa13□□□□□ -0.33
SNX6-209ENST00000557265 EPM2AIP1Q7L775 607 aaPredicted RBP13□□□□□ -0.33
SNX6-209ENST00000557265 ACOT1Q86TX2 421 aa13□□□□□ -0.33
SNX6-209ENST00000557265 SLCO6A1Q86UG4 719 aa13□□□□□ -0.33
SNX6-209ENST00000557265 NELFCDQ8IXH7 590 aa13□□□□□ -0.33
SNX6-209ENST00000557265 ZMIZ2Q8NF64 920 aa13□□□□□ -0.33
SNX6-209ENST00000557265 SETD7Q8WTS6 366 aaKnown RBP13□□□□□ -0.33
SNX6-209ENST00000557265 BHMTQ93088 406 aa13□□□□□ -0.33
SNX6-209ENST00000557265 ELMO3Q96BJ8 720 aa13□□□□□ -0.33
SNX6-209ENST00000557265 TOE1Q96GM8 510 aaKnown RBP13□□□□□ -0.33
SNX6-209ENST00000557265 TNIP3Q96KP6 325 aa13□□□□□ -0.33
SNX6-209ENST00000557265 SMOQ99835 787 aa13□□□□□ -0.33
SNX6-209ENST00000557265 ZDHHC5Q9C0B5 715 aa13□□□□□ -0.33
SNX6-209ENST00000557265 LRRC27Q9C0I9 530 aa13□□□□□ -0.33
SNX6-209ENST00000557265 TNMDQ9H2S6 317 aa13□□□□□ -0.33
SNX6-209ENST00000557265 TLR8Q9NR97 1041 aaKnown RBP13□□□□□ -0.33
SNX6-209ENST00000557265 HELZP42694 1942 aaKnown RBP13□□□□□ -0.33
SNX6-209ENST00000557265 A0A1B0GTW7 788 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 MEI4A8MW99 385 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 CBFA2T3O75081 653 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 CCDC130P13994 396 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 PDCP20941 246 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 ATP5C1P36542 298 aaKnown RBP12.99□□□□□ -0.33
SNX6-209ENST00000557265 CASP4P49662 377 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 MAP3K7CLP57077 242 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 ASIC1P78348 528 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms