RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 H7C4K7 107 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 NCAM2O15394 837 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 EPB41L2O43491 1005 aaKnown RBP5□□□□□ -1.61
PRPF39-210ENST00000556718 VPS4BO75351 444 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 SOAT2O75908 522 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 GLP2RO95838 553 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 AGR2O95994 175 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 ITGA5P08648 1049 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 EGR1P18146 543 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 LRPAP1P30533 357 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 PTDSS1P48651 473 aaKnown RBP5□□□□□ -1.61
PRPF39-210ENST00000556718 TCF15Q12870 199 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 KLF9Q13886 244 aaPredicted RBP5□□□□□ -1.61
PRPF39-210ENST00000556718 PTPRRQ15256 657 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 TAF5Q15542 800 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 TIGD6Q17RP2 521 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 NBPF8Q3BBV2 869 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 CD300EQ496F6 205 aaPredicted RBP5□□□□□ -1.61
PRPF39-210ENST00000556718 EEF1AKMT2Q5JPI9 291 aaKnown RBP5□□□□□ -1.61
PRPF39-210ENST00000556718 CACHD1Q5VU97 1274 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 PLAG1Q6DJT9 500 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 MRNIPQ6NTE8 343 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 MZT2AQ6P582 158 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 CRTC1Q6UUV9 634 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 ZDHHC24Q6UX98 284 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 RASAL3Q86YV0 1011 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 CCDC117Q8IWD4 279 aaPredicted RBP5□□□□□ -1.61
PRPF39-210ENST00000556718 NAXEQ8NCW5 288 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 STYXQ8WUJ0 223 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 WASF1Q92558 559 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 EID2BQ96D98 161 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 MPP4Q96JB8 637 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 UBXN10Q96LJ8 280 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 SLC46A1Q96NT5 459 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 TRIB1Q96RU8 372 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 GDF15Q99988 308 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 PCDHAC1Q9H158 963 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 SAYSD1Q9NPB0 183 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 ITM2CQ9NQX7 267 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 INTS13Q9NVM9 706 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 TERF2IPQ9NYB0 399 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 TMOD4Q9NZQ9 345 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 FLRT1Q9NZU1 646 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 HERC5Q9UII4 1024 aaKnown RBP5□□□□□ -1.61
PRPF39-210ENST00000556718 CA14Q9ULX7 337 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 CAPN11Q9UMQ6 739 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 RAD54BQ9Y620 910 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 PRAMEF33A0A0G2JMD5 474 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 PRRT4C9JH25 899 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 EIF3FO00303 357 aaPredicted RBP4.99□□□□□ -1.61
PRPF39-210ENST00000556718 KCNAB3O43448 404 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 KCNQ3O43525 872 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 RGS10O43665 173 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 CCNT2O60583 730 aaKnown RBP4.99□□□□□ -1.61
PRPF39-210ENST00000556718 PRAMEF10O60809 474 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 RASAL1O95294 804 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 PRR35P0CG20 571 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 VEGFAP15692 232 aaPredicted RBP4.99□□□□□ -1.61
PRPF39-210ENST00000556718 NPPBP16860 134 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 HNRNPMP52272 730 aaKnown RBP eCLIP4.99□□□□□ -1.61
PRPF39-210ENST00000556718 LOXL3P58215 753 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 FPGSQ05932 587 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 NSUN2Q08J23 767 aaKnown RBP eCLIP4.99□□□□□ -1.61
PRPF39-210ENST00000556718 TMEM119Q4V9L6 283 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 TAPT1Q6NXT6 567 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 LVRNQ6Q4G3 990 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 CFAP52Q8N1V2 620 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 PPHLN1Q8NEY8 458 aaKnown RBP4.99□□□□□ -1.61
PRPF39-210ENST00000556718 ZNF48Q96MX3 618 aaPredicted RBP4.99□□□□□ -1.61
PRPF39-210ENST00000556718 MESP1Q9BRJ9 268 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 KATNAL1Q9BW62 490 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 ZBTB26Q9HCK0 441 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 HELLSQ9NRZ9 838 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 CTTNBP2NLQ9P2B4 639 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 KIF17Q9P2E2 1029 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 IGSF9Q9P2J2 1179 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 ZMYND8Q9ULU4 1186 aaPredicted RBP4.99□□□□□ -1.61
PRPF39-210ENST00000556718 NEU2Q9Y3R4 380 aa4.99□□□□□ -1.61
PRPF39-210ENST00000556718 CCDC195A0A1B0GUA6 201 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 LINC01548A6NM66 108 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 E9PLN8 166 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 ASNA1O43681 348 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 PIAS2O75928 621 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 TNFRSF6BO95407 300 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 KCNA2P16389 499 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 ATICP31939 592 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 PXNP49023 591 aaPredicted RBP4.98□□□□□ -1.61
PRPF39-210ENST00000556718 PAPOLAP51003 745 aaKnown RBP4.98□□□□□ -1.61
PRPF39-210ENST00000556718 PRKAG1P54619 331 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 ALDH18A1P54886 795 aaKnown RBP4.98□□□□□ -1.61
PRPF39-210ENST00000556718 SOX10P56693 466 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 KRTAP10-6P60371 365 aaPredicted RBP4.98□□□□□ -1.61
PRPF39-210ENST00000556718 MC2RQ01718 297 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 DDX10Q13206 875 aaKnown RBP4.98□□□□□ -1.61
PRPF39-210ENST00000556718 ETFDHQ16134 617 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 ARHGAP15Q53QZ3 475 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 ATPAF1Q5TC12 328 aaPredicted RBP4.98□□□□□ -1.61
PRPF39-210ENST00000556718 TANGO2Q6ICL3 276 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 SULT6B1Q6IMI4 303 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 JMJD6Q6NYC1 403 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms