RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 PDGFRLQ15198 375 aa25.78■■□□□ 1.72
SDR39U1-221ENST00000556707 NOP9Q86U38 636 aaKnown RBP25.78■■□□□ 1.72
SDR39U1-221ENST00000556707 FBXL6Q8N531 539 aa25.78■■□□□ 1.72
SDR39U1-221ENST00000556707 WDTC1Q8N5D0 677 aa25.78■■□□□ 1.72
SDR39U1-221ENST00000556707 EPS8L1Q8TE68 723 aa25.78■■□□□ 1.72
SDR39U1-221ENST00000556707 OSCP1Q8WVF1 389 aa25.78■■□□□ 1.72
SDR39U1-221ENST00000556707 DDX1Q92499 740 aaKnown RBP25.78■■□□□ 1.72
SDR39U1-221ENST00000556707 CFAP97Q9P2B7 532 aa25.78■■□□□ 1.72
SDR39U1-221ENST00000556707 NUDT5Q9UKK9 219 aa25.78■■□□□ 1.72
SDR39U1-221ENST00000556707 CEP83Q9Y592 693 aa25.78■■□□□ 1.72
SDR39U1-221ENST00000556707 STARD6P59095 220 aa25.77■■□□□ 1.72
SDR39U1-221ENST00000556707 TNK2Q07912 1038 aa25.77■■□□□ 1.72
SDR39U1-221ENST00000556707 PDCLQ13371 301 aa25.77■■□□□ 1.72
SDR39U1-221ENST00000556707 BSPRYQ5W0U4 402 aa25.77■■□□□ 1.72
SDR39U1-221ENST00000556707 BTBD8Q5XKL5 378 aa25.77■■□□□ 1.72
SDR39U1-221ENST00000556707 CACNA2D4Q7Z3S7 1137 aa25.77■■□□□ 1.72
SDR39U1-221ENST00000556707 TMEM110Q86TL2 294 aa25.77■■□□□ 1.72
SDR39U1-221ENST00000556707 KLF16Q9BXK1 252 aaPredicted RBP25.77■■□□□ 1.72
SDR39U1-221ENST00000556707 TBC1D17Q9HA65 648 aa25.77■■□□□ 1.72
SDR39U1-221ENST00000556707 DUS2Q9NX74 493 aaKnown RBP25.77■■□□□ 1.72
SDR39U1-221ENST00000556707 GTSE1Q9NYZ3 720 aa25.77■■□□□ 1.72
SDR39U1-221ENST00000556707 COL4A3Q01955 1670 aa25.77■■□□□ 1.72
SDR39U1-221ENST00000556707 MDM4O15151 490 aa25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 GLULP15104 373 aa25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 MLLT6P55198 1093 aaPredicted RBP25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 TAF3Q5VWG9 929 aa25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 TRIM68Q6AZZ1 485 aa25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 TPRG1Q6ZUI0 275 aa25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 SCUBE3Q8IX30 993 aa25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 C1orf131Q8NDD1 294 aaKnown RBP25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 CLEC4CQ8WTT0 213 aa25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 NOX5Q96PH1 765 aa25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 DDX23Q9BUQ8 820 aaKnown RBP25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 MIS12Q9H081 205 aa25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 PDCL3Q9H2J4 239 aa25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 EBF3Q9H4W6 596 aa25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 HPS4Q9NQG7 708 aa25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 NOCTQ9UK39 431 aaKnown RBP25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 WNT6Q9Y6F9 365 aa25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 PIAS3Q9Y6X2 628 aa25.76■■□□□ 1.71
SDR39U1-221ENST00000556707 KMT2EQ8IZD2 1858 aa25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 E2F8A0AVK6 867 aa25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 E5RJQ4 531 aa25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 SART1O43290 800 aaKnown RBP25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 CDH5P33151 784 aaPredicted RBP25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 IFNAR2P48551 515 aa25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 RUNX3Q13761 415 aa25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 ITPRIPL2Q3MIP1 535 aa25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 RSRC2Q7L4I2 434 aaKnown RBP25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 ZNF677Q86XU0 584 aa25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 TMEM35BQ8NCS4 154 aa25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 FLCNQ8NFG4 579 aa25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 PPP1R13BQ96KQ4 1090 aa25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 CPXM1Q96SM3 734 aa25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 C8orf33Q9H7E9 229 aaPredicted RBP25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 ABCC13Q9NSE7 274 aa25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 OLA1Q9NTK5 396 aaKnown RBP25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 MYO6Q9UM54 1294 aa25.75■■□□□ 1.71
SDR39U1-221ENST00000556707 SLC9A3R1O14745 358 aaPredicted RBP25.74■■□□□ 1.71
SDR39U1-221ENST00000556707 PAPSS1O43252 624 aaPredicted RBP25.74■■□□□ 1.71
SDR39U1-221ENST00000556707 LTFP02788 710 aa25.74■■□□□ 1.71
SDR39U1-221ENST00000556707 ARSAP15289 507 aa25.74■■□□□ 1.71
SDR39U1-221ENST00000556707 KPNA1P52294 538 aaPredicted RBP25.74■■□□□ 1.71
SDR39U1-221ENST00000556707 GOLGA8FQ08AF8 430 aa25.74■■□□□ 1.71
SDR39U1-221ENST00000556707 GOLGA8DPQ0D2H9 430 aa25.74■■□□□ 1.71
SDR39U1-221ENST00000556707 EFEMP1Q12805 493 aa25.74■■□□□ 1.71
SDR39U1-221ENST00000556707 EML3Q32P44 896 aa25.74■■□□□ 1.71
SDR39U1-221ENST00000556707 CWF19L1Q69YN2 538 aaKnown RBP25.74■■□□□ 1.71
SDR39U1-221ENST00000556707 SUGP1Q8IWZ8 645 aaKnown RBP25.74■■□□□ 1.71
SDR39U1-221ENST00000556707 RNF214Q8ND24 703 aa25.74■■□□□ 1.71
SDR39U1-221ENST00000556707 ATP2A3Q93084 1043 aa25.74■■□□□ 1.71
SDR39U1-221ENST00000556707 LINC00597Q9H2U6 94 aa25.74■■□□□ 1.71
SDR39U1-221ENST00000556707 IFNKQ9P0W0 207 aa25.74■■□□□ 1.71
SDR39U1-221ENST00000556707 SH3BP1Q9Y3L3 701 aa25.74■■□□□ 1.71
SDR39U1-221ENST00000556707 SHISA7A6NL88 538 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 STK25O00506 426 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 MMEP08473 750 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 IRF1P10914 325 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 PBX1P40424 430 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 CLCN5P51795 746 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 ASTLQ6HA08 431 aaPredicted RBP25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 MIB1Q86YT6 1006 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 TTC8Q8TAM2 541 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 RNF139Q8WU17 664 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 SLC20A1Q8WUM9 679 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 BAP1Q92560 729 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 EDEM1Q92611 657 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 GOLGA1Q92805 767 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 WBP2Q969T9 261 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 MSANTD3Q96H12 275 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 MARCH2Q9P0N8 246 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 TBC1D14Q9P2M4 693 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 TJP2Q9UDY2 1190 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 RASAL2Q9UJF2 1139 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 STRIP2Q9ULQ0 834 aa25.73■■□□□ 1.71
SDR39U1-221ENST00000556707 KANSL1LA0AUZ9 987 aa25.72■■□□□ 1.71
SDR39U1-221ENST00000556707 OTOL1A6NHN0 477 aaPredicted RBP25.72■■□□□ 1.71
SDR39U1-221ENST00000556707 MAN2B1O00754 1011 aa25.72■■□□□ 1.71
SDR39U1-221ENST00000556707 SCAMP3O14828 347 aaKnown RBP25.72■■□□□ 1.71
SDR39U1-221ENST00000556707 LSM8O95777 96 aaKnown RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms