RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 SFTPA1Q8IWL2 248 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 FMR1NBQ8N0W7 255 aaPredicted RBP11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 ALLCQ8N6M5 410 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 SEMA4DQ92854 862 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 TMEM176AQ96HP8 235 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 LOXL4Q96JB6 756 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 ZFRQ96KR1 1074 aaKnown RBP11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 GSDMAQ96QA5 445 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 XPO6Q96QU8 1125 aaKnown RBP11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 DUSP15Q9H1R2 295 aaPredicted RBP11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 IL37Q9NZH6 218 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 DEC1Q9P2X7 70 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 SCML2Q9UQR0 700 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 PCDHA5Q9Y5H7 936 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 FAM92AA1XBS5 289 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 TRIM49BA6NDI0 452 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 MAP3K13O43283 966 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 HMBSP08397 361 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 MPLP40238 635 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 TNFRSF4P43489 277 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 ZCWPW2Q504Y3 356 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 EOGTQ5NDL2 527 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 C10orf76Q5T2E6 689 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 MIB1Q86YT6 1006 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 TTC39CQ8N584 583 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 ZNF513Q8N8E2 541 aaPredicted RBP11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 IL17RCQ8NAC3 791 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 MDGA1Q8NFP4 955 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 WHAMMQ8TF30 809 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 HMGB4Q8WW32 186 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 TATDN2Q93075 761 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 BHMTQ93088 406 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 WBP2Q969T9 261 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 ZC3H10Q96K80 434 aaKnown RBP11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 BBS2Q9BXC9 721 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 KLF16Q9BXK1 252 aaPredicted RBP11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 DUSP16Q9BY84 665 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 SMOC1Q9H4F8 434 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 NMUR1Q9HB89 426 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 PNPLA8Q9NP80 782 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 CISHQ9NSE2 258 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 DNAJC17Q9NVM6 304 aaKnown RBP11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 OSER1Q9NX31 292 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 EBF1Q9UH73 591 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 RASAL2Q9UJF2 1139 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 DNMT3LQ9UJW3 386 aa11.14□□□□□ -0.63
SPTLC2-205ENST00000556607 SPAG17Q6Q759 2223 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 TCRBV21S2A2A0A5A6 115 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 HHLA1C9JL84 531 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 SGK1O00141 431 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 PSMA7O14818 248 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 SLC30A4O14863 429 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 SLC16A3O15427 465 aaKnown RBP11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 ZBTB24O43167 697 aaPredicted RBP11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 TULP3O75386 442 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 ZNF806P0C7X5 589 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 TYRP14679 529 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 CD19P15391 556 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 WASP42768 502 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 PLA2G4AP47712 749 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 DHPSP49366 369 aaPredicted RBP11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 PSEN1P49768 467 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 YWHAEP62258 255 aaKnown RBP11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 MESP2Q0VG99 397 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 LRMPQ12912 555 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 CCDC40Q4G0X9 1142 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 CBWD6Q4V339 395 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 CBWD3Q5JTY5 395 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 CBWD5Q5RIA9 395 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 GRAMD4Q6IC98 578 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 SDE2Q6IQ49 451 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 KLHL10Q6JEL2 608 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 TMEM92Q6UXU6 159 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 HTR3DQ70Z44 454 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 RSRC2Q7L4I2 434 aaKnown RBP11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 TRMT11Q7Z4G4 463 aaKnown RBP11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 RLN3Q8WXF3 142 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 ERLEC1Q96DZ1 483 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 SPACA7Q96KW9 195 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 CNOT6LQ96LI5 555 aaKnown RBP11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 ARID3AQ99856 593 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 CYLDQ9NQC7 956 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 VPS45Q9NRW7 570 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 PLK2Q9NYY3 685 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 HESX1Q9UBX0 185 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 ARMCX3Q9UH62 379 aaPredicted RBP11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 PCDHGA5Q9Y5G8 931 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 FRYLO94915 3013 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 DCHS1Q96JQ0 3298 aa11.13□□□□□ -0.63
SPTLC2-205ENST00000556607 CEP192Q8TEP8 1941 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 TRIM24O15164 1050 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 HOXC11O43248 304 aaPredicted RBP11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 CAVIN2O95810 425 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 DGKGP49619 791 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 KIF11P52732 1056 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 PMS1P54277 932 aaKnown RBP11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 RAD23BP54727 409 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 LRRC63Q05C16 580 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 EFEMP1Q12805 493 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 GOLGA7BQ2TAP0 167 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms