RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 SRGAP2CP0DJJ0 459 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 SSTR3P32745 418 aaPredicted RBP5.3□□□□□ -1.56
TMEM260-210ENST00000556422 PTGIRP43119 386 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 TMED10P49755 219 aaKnown RBP5.3□□□□□ -1.56
TMEM260-210ENST00000556422 NEK3P51956 506 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 NOMO3P69849 1222 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 MRPS15P82914 257 aaKnown RBP5.3□□□□□ -1.56
TMEM260-210ENST00000556422 MCL1Q07820 350 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 ARHGAP1Q07960 439 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 TBL3Q12788 808 aaKnown RBP5.3□□□□□ -1.56
TMEM260-210ENST00000556422 CAMK2BQ13554 666 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 SEPT6Q14141 434 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 IER5Q5VY09 327 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 ALS2CLQ60I27 953 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 DUPD1Q68J44 220 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 TAPT1Q6NXT6 567 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 CRTC1Q6UUV9 634 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 ZNF677Q86XU0 584 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 ZFAND2BQ8WV99 257 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 FAM167AQ96KS9 214 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 SPATA33Q96N06 139 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 SMC6Q96SB8 1091 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 SIKE1Q9BRV8 207 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 TXLNGYQ9BZA5 131 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 WNT8AQ9H1J5 351 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 AZI2Q9H6S1 392 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.3□□□□□ -1.56
TMEM260-210ENST00000556422 MALT1Q9UDY8 824 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 FAM169AQ9Y6X4 670 aa5.3□□□□□ -1.56
TMEM260-210ENST00000556422 APOL1O14791 398 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 GUCY1B2O75343 617 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 PRKAR2AP13861 404 aaKnown RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 HSD17B3P37058 310 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 EFNA5P52803 228 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 SEC13P55735 322 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 MYL6P60660 151 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 PDE1BQ01064 536 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 NCOA4Q13772 614 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 CYP1B1Q16678 543 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 TMEM270Q6UE05 265 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 ZDHHC24Q6UX98 284 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 ZNF600Q6ZNG1 722 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 TMC3Q7Z5M5 1100 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 ZBTB33Q86T24 672 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 CDR2LQ86X02 465 aaPredicted RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 WDR49Q8IV35 697 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 CD302Q8IX05 232 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 TMEM192Q8IY95 271 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 SYTL1Q8IYJ3 562 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 LINC01465Q8N7H1 131 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 MAB21L3Q8N8X9 362 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 RFWD2Q8NHY2 731 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 MS4A4AQ96JQ5 239 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 XYLT2Q9H1B5 865 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 EPB41L4BQ9H329 900 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 FZD8Q9H461 694 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 MROH8Q9H579 483 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 EURLQ9NYK6 297 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 IL1RAPL1Q9NZN1 696 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 ANAPC7Q9UJX3 599 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 CORO1CQ9ULV4 474 aaPredicted RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 TMCO1Q9UM00 188 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 PCDHGA3Q9Y5H0 932 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 GRIN2DO15399 1336 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 ZNF236Q9UL36 1845 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 NOP56O00567 594 aaKnown RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 GAS2O43903 313 aaKnown RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 PHF2O75151 1096 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 C22orf31O95567 290 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 PRKCBP05771 671 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 TXNP10599 105 aaKnown RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 HSPA6P17066 643 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 TMEM11P17152 192 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 CLCN3P51790 818 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 INHBCP55103 352 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 MBTD1Q05BQ5 628 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 NFE2L1Q14494 772 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 MXD4Q14582 209 aaPredicted RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 P3H1Q32P28 736 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 ZNF792Q3KQV3 632 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 EEF1DP3Q658K8 133 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 RAPH1Q70E73 1250 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 ARMCX2Q7L311 632 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 FASTKD5Q7L8L6 764 aaKnown RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 ANKS1BQ7Z6G8 1248 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 JAMLQ86YT9 394 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 RHPN2Q8IUC4 686 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 PASD1Q8IV76 773 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 CARNMT1Q8N4J0 409 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 SH2D3CQ8N5H7 860 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 SPATA18Q8TC71 538 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 UTP15Q8TED0 518 aaKnown RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 WDR60Q8WVS4 1066 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 PPP2R3CQ969Q6 453 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 SRPK1Q96SB4 655 aaKnown RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 MRPL4Q9BYD3 311 aaKnown RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 UBE2OQ9C0C9 1292 aaKnown RBP5.29□□□□□ -1.56
TMEM260-210ENST00000556422 DPH5Q9H2P9 285 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 ARHGEF38Q9NXL2 777 aa5.29□□□□□ -1.56
TMEM260-210ENST00000556422 GRHL1Q9NZI5 618 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms