RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 CDC23Q9UJX2 597 aa4.27□□□□□ -1.73
SUPT16H-206ENST00000556309 COQ9O75208 318 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 RBMXL2O75526 392 aaKnown RBP4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 C1RP00736 705 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 PECAM1P16284 738 aaPredicted RBP4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 EEF1GP26641 437 aaKnown RBP4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 GABRB3P28472 473 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 RBL1P28749 1068 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 HTR7P34969 479 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 RENBPP51606 427 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 COPAP53621 1224 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 HOXA4Q00056 320 aaPredicted RBP4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 GPS1Q13098 491 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 PROSER3Q2NL68 480 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 AWAT1Q58HT5 328 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 FAXCQ5TGI0 409 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 PRAMEF17Q5VTA0 474 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 PAPD7Q5XG87 772 aaKnown RBP4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 ABLIM2Q6H8Q1 611 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 GRHL2Q6ISB3 625 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 MZT2AQ6P582 158 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 TRIM72Q6ZMU5 477 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 ZNF782Q6ZMW2 699 aaPredicted RBP4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 CHSY1Q86X52 802 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 RAB11FIP4Q86YS3 637 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 CCDC28AQ8IWP9 274 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 FAM186BQ8IYM0 893 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 DDB2Q92466 427 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 DPF1Q92782 380 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 DAZAP1Q96EP5 407 aaKnown RBP4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 PRR11Q96HE9 360 aaPredicted RBP4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 FAM227BQ96M60 508 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 ELAC2Q9BQ52 826 aaKnown RBP4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 NKX1-2Q9UD57 310 aaPredicted RBP4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 STEAP1Q9UHE8 339 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 CEP83Q9Y592 693 aa4.26□□□□□ -1.73
SUPT16H-206ENST00000556309 CCDC194A0A1B0GVG4 234 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 TISP43B9A030 160 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 PODXLO00592 558 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 PROP1O75360 226 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 MYCLP12524 364 aaPredicted RBP4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 ZNF37AP17032 561 aaPredicted RBP4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 PBX1P40424 430 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 HSPA7P48741 367 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 EIF4A1P60842 406 aaKnown RBP4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 MPEG1Q2M385 716 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 SUMO4Q6EEV6 95 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 FBXO38Q6PIJ6 1188 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 SERPINA13PQ6UXR4 307 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 PNLDC1Q8NA58 520 aaKnown RBP4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 BRI3BPQ8WY22 251 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 SNX27Q96L92 541 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 GDF15Q99988 308 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 ZBTB26Q9HCK0 441 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 NLRC4Q9NPP4 1024 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 ASIC5Q9NY37 505 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 RGL1Q9NZL6 768 aa4.25□□□□□ -1.73
SUPT16H-206ENST00000556309 ZSCAN9O15535 394 aaPredicted RBP4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 KCNQ3O43525 872 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 CCNT2O60583 730 aaKnown RBP4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 TMEM225BP0DP42 221 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 APEHP13798 732 aaKnown RBP4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 CD19P15391 556 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 MST1P26927 711 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 MPGP29372 298 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 NHLH1Q02575 133 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 MTAPQ13126 283 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 TMTC4Q5T4D3 741 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 GGT6Q6P531 493 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 MTHFD1LQ6UB35 978 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 BCDIN3DQ7Z5W3 292 aaKnown RBP4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 MORC1Q86VD1 984 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 P3H2Q8IVL5 708 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 SFTPA1Q8IWL2 248 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 ACRBPQ8NEB7 543 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 MAFAQ8NHW3 353 aaPredicted RBP4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 MBD3L2Q8NHZ7 208 aaPredicted RBP4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 SUN3Q8TAQ9 357 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 DEPTORQ8TB45 409 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 IPO4Q8TEX9 1081 aaKnown RBP4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 GJA10Q969M2 543 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 ZDHHC12Q96GR4 267 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 ZC3H10Q96K80 434 aaKnown RBP4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 SNX18Q96RF0 628 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 SH2D3AQ9BRG2 576 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 USP29Q9HBJ7 922 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 SNX15Q9NRS6 342 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 SLC52A1Q9NWF4 448 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 TFCP2L1Q9NZI6 479 aa4.24□□□□□ -1.73
SUPT16H-206ENST00000556309 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.23□□□□□ -1.73
SUPT16H-206ENST00000556309 TCRBV5S1A1TA0A578 114 aa4.23□□□□□ -1.73
SUPT16H-206ENST00000556309 WIPF3A6NGB9 483 aa4.23□□□□□ -1.73
SUPT16H-206ENST00000556309 LINC01548A6NM66 108 aa4.23□□□□□ -1.73
SUPT16H-206ENST00000556309 PRAMEF2O60811 474 aa4.23□□□□□ -1.73
SUPT16H-206ENST00000556309 WDR47O94967 919 aa4.23□□□□□ -1.73
SUPT16H-206ENST00000556309 SRGAP2BP0DMP2 458 aa4.23□□□□□ -1.73
SUPT16H-206ENST00000556309 CYP2D6P10635 497 aa4.23□□□□□ -1.73
SUPT16H-206ENST00000556309 EGR1P18146 543 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms