RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 PDZD8Q8NEN9 1154 aa10.54□□□□□ -0.72
MTHFD1-213ENST00000556284 VN1R2Q8NFZ6 395 aa10.54□□□□□ -0.72
MTHFD1-213ENST00000556284 GOLGA1Q92805 767 aa10.54□□□□□ -0.72
MTHFD1-213ENST00000556284 FBXO32Q969P5 355 aa10.54□□□□□ -0.72
MTHFD1-213ENST00000556284 CALR3Q96L12 384 aaKnown RBP10.54□□□□□ -0.72
MTHFD1-213ENST00000556284 FAM161BQ96MY7 647 aa10.54□□□□□ -0.72
MTHFD1-213ENST00000556284 SLITRK1Q96PX8 696 aa10.54□□□□□ -0.72
MTHFD1-213ENST00000556284 TRIM62Q9BVG3 475 aa10.54□□□□□ -0.72
MTHFD1-213ENST00000556284 PACSIN1Q9BY11 444 aa10.54□□□□□ -0.72
MTHFD1-213ENST00000556284 TSGA10Q9BZW7 698 aa10.54□□□□□ -0.72
MTHFD1-213ENST00000556284 SFXN1Q9H9B4 322 aa10.54□□□□□ -0.72
MTHFD1-213ENST00000556284 UVRAGQ9P2Y5 699 aa10.54□□□□□ -0.72
MTHFD1-213ENST00000556284 TJP2Q9UDY2 1190 aa10.54□□□□□ -0.72
MTHFD1-213ENST00000556284 PPP2R2CQ9Y2T4 447 aa10.54□□□□□ -0.72
MTHFD1-213ENST00000556284 PTPRDP23468 1912 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 CCDC195A0A1B0GUA6 201 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 TCRBV5S1A1TA0A578 114 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 FAM170AA1A519 330 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 GOLGA8SH3BPF8 625 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 CCL16O15467 120 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 HSF2BPO75031 334 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 RFPL2O75678 378 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 ZDHHC11BP0C7U3 371 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 KRT3P12035 628 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 YWHAZP63104 245 aaKnown RBP10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 TAF10Q12962 218 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 MTMR3Q13615 1198 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 COL19A1Q14993 1142 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 QPCTQ16769 361 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 CTC1Q2NKJ3 1217 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 PABPC1LQ4VXU2 614 aaKnown RBP10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 FAM102AQ5T9C2 384 aaPredicted RBP10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 SNX30Q5VWJ9 437 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 ANKRD54Q6NXT1 300 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 BEND5Q7L4P6 421 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 RHOT2Q8IXI1 618 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 CLEC4CQ8WTT0 213 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 ARHGEF26Q96DR7 871 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 CDX2Q99626 313 aaPredicted RBP10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 SELENOOQ9BVL4 669 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 LACRTQ9GZZ8 138 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 TLR8Q9NR97 1041 aaKnown RBP10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 MYO1AQ9UBC5 1043 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 LCMT1Q9UIC8 334 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 TMEM59LQ9UK28 342 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 PYCARDQ9ULZ3 195 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 MAGED2Q9UNF1 606 aaPredicted RBP10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 LAMA3Q16787 3333 aa10.53□□□□□ -0.72
MTHFD1-213ENST00000556284 TRANK1O15050 2925 aa10.52□□□□□ -0.72
MTHFD1-213ENST00000556284 YJEFN3A6XGL0 299 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 E7ENQ6 273 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 KRT86O43790 486 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 MTA2O94776 668 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 GLP2RO95838 553 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 LTFP02788 710 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 EPHA5P54756 1037 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 YWHAGP61981 247 aaKnown RBP eCLIP10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 RBM10P98175 930 aaKnown RBP10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 IFRD2Q12894 506 aaPredicted RBP10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 BSPRYQ5W0U4 402 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 DCUN1D2Q6PH85 259 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 BHLHA9Q7RTU4 235 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 PHLDB2Q86SQ0 1253 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 ZNF276Q8N554 614 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 RNF10Q8N5U6 811 aaKnown RBP10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 SLC35G2Q8TBE7 412 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 FEZF2Q8TBJ5 459 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 RFFLQ8WZ73 363 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 SMG7Q92540 1137 aaKnown RBP10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 NDRG1Q92597 394 aaKnown RBP10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 FAM149B1Q96BN6 582 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 ZNF707Q96C28 371 aaPredicted RBP10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 SLC2A13Q96QE2 648 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 CDK5RAP1Q96SZ6 601 aaKnown RBP10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 CORO1BQ9BR76 489 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 NUP85Q9BW27 656 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 LRRC3Q9BY71 257 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 POPDC2Q9HBU9 364 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 ASAH2Q9NR71 780 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 KCND1Q9NSA2 647 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 ABCC13Q9NSE7 274 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 TMEM51Q9NW97 253 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 CLIC5Q9NZA1 410 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 TRPM5Q9NZQ8 1165 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 GMIPQ9P107 970 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 CTTNBP2NLQ9P2B4 639 aa10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 CHORDC1Q9UHD1 332 aaPredicted RBP10.52□□□□□ -0.73
MTHFD1-213ENST00000556284 COL4A4P53420 1690 aaPredicted RBP10.51□□□□□ -0.73
MTHFD1-213ENST00000556284 A0A1W2PQH9 124 aa10.51□□□□□ -0.73
MTHFD1-213ENST00000556284 ZNF840PA6NDX5 716 aa10.51□□□□□ -0.73
MTHFD1-213ENST00000556284 GOLGA6L9A6NEM1 432 aa10.51□□□□□ -0.73
MTHFD1-213ENST00000556284 TMEM191CA6NGB0 347 aa10.51□□□□□ -0.73
MTHFD1-213ENST00000556284 ZNF197O14709 1029 aa10.51□□□□□ -0.73
MTHFD1-213ENST00000556284 CAPN9O14815 690 aa10.51□□□□□ -0.73
MTHFD1-213ENST00000556284 LINC01565O15544 149 aa10.51□□□□□ -0.73
MTHFD1-213ENST00000556284 DAB1O75553 588 aa10.51□□□□□ -0.73
MTHFD1-213ENST00000556284 F11P03951 625 aa10.51□□□□□ -0.73
MTHFD1-213ENST00000556284 RALAP11233 206 aa10.51□□□□□ -0.73
MTHFD1-213ENST00000556284 CDC25CP30307 473 aa10.51□□□□□ -0.73
MTHFD1-213ENST00000556284 NOS2P35228 1153 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms