RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 DBF4BQ8NFT6 615 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 RIN2Q8WYP3 895 aaPredicted RBP15.35■□□□□ 0.05
VPS33B-205ENST00000556096 SEPT8Q92599 483 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 BADQ92934 168 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 NT5C3BQ969T7 300 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 RNF157Q96PX1 679 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 SLC2A13Q96QE2 648 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 SNRNP25Q9BV90 132 aaKnown RBP15.35■□□□□ 0.05
VPS33B-205ENST00000556096 CALN1Q9BXU9 219 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 MAK16Q9BXY0 300 aaKnown RBP15.35■□□□□ 0.05
VPS33B-205ENST00000556096 TSPYL1Q9H0U9 437 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 CNGB3Q9NQW8 809 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 TBC1D13Q9NVG8 400 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 PLAAQ9Y263 795 aa15.35■□□□□ 0.05
VPS33B-205ENST00000556096 HHLA1C9JL84 531 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 H0YGN5 161 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 KIAA0355O15063 1070 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 ITGB1P05556 798 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 TFE3P19532 575 aaPredicted RBP15.34■□□□□ 0.05
VPS33B-205ENST00000556096 ADCY8P40145 1251 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 OTUD4Q01804 1114 aaKnown RBP15.34■□□□□ 0.05
VPS33B-205ENST00000556096 KRT81Q14533 505 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 BNIPLQ7Z465 357 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 DEFB106AQ8N104 65 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 ACTL9Q8TC94 416 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 HASPINQ8TF76 798 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 UBLCP1Q8WVY7 318 aaPredicted RBP15.34■□□□□ 0.05
VPS33B-205ENST00000556096 MYLPFQ96A32 169 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 PCDH18Q9HCL0 1135 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 FAN1Q9Y2M0 1017 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 ATP8A1Q9Y2Q0 1164 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 NFS1Q9Y697 457 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 MICAL3Q7RTP6 2002 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 B4GALT3O60512 393 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 PARNO95453 639 aaKnown RBP15.34■□□□□ 0.05
VPS33B-205ENST00000556096 RARGP13631 454 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 IL4RP24394 825 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 NDUFV1P49821 464 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 PMS2P54278 862 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 DAOAP59103 153 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 TRIP13Q15645 432 aaPredicted RBP15.34■□□□□ 0.05
VPS33B-205ENST00000556096 DEFB128Q7Z7B8 93 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 PSTKQ8IV42 348 aaKnown RBP15.34■□□□□ 0.05
VPS33B-205ENST00000556096 SCML4Q8N228 414 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 FAM149B1Q96BN6 582 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 FAF2Q96CS3 445 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 FAM193BQ96PV7 902 aaPredicted RBP15.34■□□□□ 0.05
VPS33B-205ENST00000556096 NPY6RQ99463 290 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 ZNF670Q9BS34 389 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 ADAM33Q9BZ11 813 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 PABPC3Q9H361 631 aaKnown RBP15.34■□□□□ 0.05
VPS33B-205ENST00000556096 POPDC2Q9HBU9 364 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 PNPLA8Q9NP80 782 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 VPS18Q9P253 973 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 ANAPC5Q9UJX4 755 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 STAP1Q9ULZ2 295 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 PCDHB7Q9Y5E2 793 aa15.34■□□□□ 0.05
VPS33B-205ENST00000556096 NDC80O14777 642 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 TRAPPC3O43617 180 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 TIMP1P01033 207 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 CSF2RAP15509 400 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 ITGA8P53708 1063 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 CACNA2D1P54289 1103 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 DYNLT1P63172 113 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 TSPY1Q01534 308 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 YWHAHQ04917 246 aaPredicted RBP15.33■□□□□ 0.04
VPS33B-205ENST00000556096 RNASELQ05823 741 aaKnown RBP15.33■□□□□ 0.04
VPS33B-205ENST00000556096 MMRN1Q13201 1228 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 DPYSL2Q16555 572 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 TCTN1Q2MV58 587 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 ZC3H12AQ5D1E8 599 aaKnown RBP15.33■□□□□ 0.04
VPS33B-205ENST00000556096 OR10T2Q8NGX3 314 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 NDRG1Q92597 394 aaKnown RBP15.33■□□□□ 0.04
VPS33B-205ENST00000556096 ZBTB9Q96C00 473 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 HAUS1Q96CS2 278 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 KCNK16Q96T55 309 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 ULBP1Q9BZM6 244 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 FOXP3Q9BZS1 431 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 PCDH9Q9HC56 1237 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 TMEM30AQ9NV96 361 aa15.33■□□□□ 0.04
VPS33B-205ENST00000556096 OAZ2O95190 189 aa15.32■□□□□ 0.04
VPS33B-205ENST00000556096 CXCL10P02778 98 aa15.32■□□□□ 0.04
VPS33B-205ENST00000556096 ACRP10323 421 aa15.32■□□□□ 0.04
VPS33B-205ENST00000556096 L1CAMP32004 1257 aa15.32■□□□□ 0.04
VPS33B-205ENST00000556096 EIF3BP55884 814 aaKnown RBP15.32■□□□□ 0.04
VPS33B-205ENST00000556096 DCAF6Q58WW2 860 aa15.32■□□□□ 0.04
VPS33B-205ENST00000556096 ANKRD20A8PQ5CZ79 823 aa15.32■□□□□ 0.04
VPS33B-205ENST00000556096 SLC9A4Q6AI14 798 aa15.32■□□□□ 0.04
VPS33B-205ENST00000556096 LRRTM3Q86VH5 581 aa15.32■□□□□ 0.04
VPS33B-205ENST00000556096 IRGQQ8WZA9 623 aa15.32■□□□□ 0.04
VPS33B-205ENST00000556096 TMLHEQ9NVH6 421 aa15.32■□□□□ 0.04
VPS33B-205ENST00000556096 GPATCH2LQ9NWQ4 482 aa15.32■□□□□ 0.04
VPS33B-205ENST00000556096 RRN3Q9NYV6 651 aa15.32■□□□□ 0.04
VPS33B-205ENST00000556096 SAE1Q9UBE0 346 aaPredicted RBP15.32■□□□□ 0.04
VPS33B-205ENST00000556096 NR2E3Q9Y5X4 410 aa15.32■□□□□ 0.04
VPS33B-205ENST00000556096 LTBP2Q14767 1821 aa15.32■□□□□ 0.04
VPS33B-205ENST00000556096 F8W810 466 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 DNALI1O14645 258 aaPredicted RBP15.31■□□□□ 0.04
VPS33B-205ENST00000556096 NRP1O14786 923 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 HOXA2O43364 376 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms