RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 HHLA1C9JL84 531 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 SGK1O00141 431 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 CETN3O15182 167 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 ZBTB24O43167 697 aaPredicted RBP8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 CACNG3O60359 315 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 ZNF217O75362 1048 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 TULP3O75386 442 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 RALAP11233 206 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 HNRNPLP14866 589 aaKnown RBP eCLIP8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 GBP1P32455 592 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 TIE1P35590 1138 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 CHKAP35790 457 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 PIK3CAP42336 1068 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 CREB5Q02930 508 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 PPP3CAQ08209 521 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 IFRD2Q12894 506 aaPredicted RBP8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 LMAN2Q12907 356 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 SF3A2Q15428 464 aaKnown RBP8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 ZCWPW2Q504Y3 356 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 RNF43Q68DV7 783 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 ARHGAP17Q68EM7 881 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 SDE2Q6IQ49 451 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 ANO7Q6IWH7 933 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 SLC36A4Q6YBV0 504 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 LPCAT2Q7L5N7 544 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 CCDC186Q7Z3E2 898 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 METTL3Q86U44 580 aaKnown RBP8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 TMEM25Q86YD3 366 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 BBS7Q8IWZ6 715 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 ELOA2Q8IYF1 753 aaPredicted RBP8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 FAM186BQ8IYM0 893 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 ARHGAP18Q8N392 663 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 ALLCQ8N6M5 410 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 C12orf29Q8N999 325 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 TERB1Q8NA31 727 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 MDGA1Q8NFP4 955 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 SPACA7Q96KW9 195 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 GSDMAQ96QA5 445 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 DCLK3Q9C098 648 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 NIF3L1Q9GZT8 377 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 CCSER2Q9H7U1 834 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 RMND1Q9NWS8 449 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 RAB20Q9NX57 234 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 GMIPQ9P107 970 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 KIAA1257Q9ULG3 409 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 COQ4Q9Y3A0 265 aa8.21□□□□□ -1.1
PTCSC3-201ENST00000556013 GON4LQ3T8J9 2241 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 DCLK1O15075 740 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 PMM2O15305 246 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 TIMM44O43615 452 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 ADAM23O75077 832 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 KCNK5O95279 499 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 KLF8O95600 359 aaPredicted RBP8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 CISD3P0C7P0 127 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 RARGP13631 454 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 CCDC130P13994 396 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 CSRP1P21291 193 aaKnown RBP8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 ACO1P21399 889 aaKnown RBP8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 PMLP29590 882 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 NTSR1P30989 418 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 PPP1R2P41236 205 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 GCLMP48507 274 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 SLC8A3P57103 927 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 FKBP3Q00688 224 aaKnown RBP8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 ANO4Q32M45 955 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 MAP7D1Q3KQU3 841 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 EMC10Q5UCC4 262 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 PEAR1Q5VY43 1037 aaPredicted RBP8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 PM20D1Q6GTS8 502 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 SPOPLQ6IQ16 392 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 SLC23A3Q6PIS1 610 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 RABEPKQ7Z6M1 372 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 C12orf40Q86WS4 652 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 SYT12Q8IV01 421 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 CCDC33Q8N5R6 958 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 ZNF513Q8N8E2 541 aaPredicted RBP8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 ANKRD52Q8NB46 1076 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 FBXL13Q8NEE6 735 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 CEP76Q8TAP6 659 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 TAS1R2Q8TE23 839 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 TMEM176AQ96HP8 235 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 TIGD1Q96MW7 591 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 GABRG3Q99928 467 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 IRX2Q9BZI1 471 aaPredicted RBP8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 APOBEC3GQ9HC16 384 aaKnown RBP8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 RXFP3Q9NSD7 469 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 POLR3BQ9NW08 1133 aaPredicted RBP8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 SLC27A6Q9Y2P4 619 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 ACACBO00763 2458 aa8.2□□□□□ -1.1
PTCSC3-201ENST00000556013 MYOFQ9NZM1 2061 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 UPK3BL1B0FP48 263 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 UPK3BL2E5RIL1 263 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 CDX4O14627 284 aaPredicted RBP8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 MAP3K13O43283 966 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 AP5Z1O43299 807 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 CLSTN1O94985 981 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 TBX18O95935 607 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 C7P10643 843 aa8.19□□□□□ -1.1
PTCSC3-201ENST00000556013 EPB41P11171 864 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms