RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	PLEKHA7	Q6IQ23	1121 aa		13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	GAREM2	Q75VX8	874 aa		13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	BEND5	Q7L4P6	421 aa		13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	ARC	Q7LC44	396 aa		13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	DNAAF5	Q86Y56	855 aa		13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	RFFL	Q8WZ73	363 aa		13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	NDRG1	Q92597	394 aa	Known RBP	13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	EDEM1	Q92611	657 aa		13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	ZNF830	Q96NB3	372 aa	Predicted RBP	13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	NUP85	Q9BW27	656 aa		13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	PACSIN1	Q9BY11	444 aa		13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	S1PR5	Q9H228	398 aa		13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	KCNF1	Q9H3M0	494 aa		13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	IL21	Q9HBE4	155 aa		13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	WDR6	Q9NNW5	1121 aa	Known RBP	13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	UVRAG	Q9P2Y5	699 aa		13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	LCMT1	Q9UIC8	334 aa		13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	FAM50B	Q9Y247	325 aa		13.1	□□□□□ -0.31
ABCD4-223	ENST00000555904	SOBP	A7XYQ1	873 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	CCP110	O43303	1012 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	ZSCAN12	O43309	604 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	KRT86	O43790	486 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	TLR5	O60602	858 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	CYP1A2	P05177	515 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	CKM	P06732	381 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	ZDHHC11B	P0C7U3	371 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	PFKL	P17858	780 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	SDC4	P31431	198 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	ATP5C1	P36542	298 aa	Known RBP	13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	AVPR1A	P37288	418 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	MATK	P42679	507 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	NAP1L1	P55209	391 aa	Known RBP	13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	CYP4F8	P98187	520 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	SMAD4	Q13485	552 aa	Known RBP	13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	CBX2	Q14781	532 aa	Predicted RBP	13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	IFI16	Q16666	785 aa	Known RBP	13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	GPR158	Q5T848	1215 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	GET4	Q7L5D6	327 aa	Predicted RBP	13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	BHLHA9	Q7RTU4	235 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	SCD5	Q86SK9	330 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	SHKBP1	Q8TBC3	707 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	FEZF2	Q8TBJ5	459 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	PIWIL1	Q96J94	861 aa	Known RBP	13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	CALR3	Q96L12	384 aa	Known RBP	13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	LRRC3	Q9BY71	257 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	FAM204A	Q9H8W3	233 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	NMUR1	Q9HB89	426 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	RRN3	Q9NYV6	651 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	DNMT3L	Q9UJW3	386 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	USP15	Q9Y4E8	981 aa	Predicted RBP	13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	ADGRG1	Q9Y653	693 aa		13.09	□□□□□ -0.31
ABCD4-223	ENST00000555904	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	TADA3	O75528	432 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	PDGFRA	P16234	1089 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	GJA1	P17302	382 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	GPD1	P21695	349 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	GBP1	P32455	592 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	NOS2	P35228	1153 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	RFC1	P35251	1148 aa	Predicted RBP	13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	NOP2	P46087	812 aa	Known RBP	13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	TAF5	Q15542	800 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	TEAD2	Q15562	447 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	SLC5A9	Q2M3M2	681 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	PUS10	Q3MIT2	529 aa	Known RBP	13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	ARHGAP29	Q52LW3	1261 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	PRSS36	Q5K4E3	855 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	TXNDC8	Q6A555	127 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	HFE2	Q6ZVN8	426 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	TMEM150A	Q86TG1	271 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	DEFB106A	Q8N104	65 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	MAB21L3	Q8N8X9	362 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	ING5	Q8WYH8	240 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	ARHGEF26	Q96DR7	871 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	TCEAL4	Q96EI5	215 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	SERPINB11	Q96P15	392 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	SLC2A13	Q96QE2	648 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	TASP1	Q9H6P5	420 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	CCSER2	Q9H7U1	834 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	TMEM51	Q9NW97	253 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	GDE1	Q9NZC3	331 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	MARCH2	Q9P0N8	246 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	ANAPC7	Q9UJX3	599 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	TMEM59L	Q9UK28	342 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	NAALADL1	Q9UQQ1	740 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	REXO2	Q9Y3B8	237 aa	Known RBP	13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	PAXBP1	Q9Y5B6	917 aa		13.08	□□□□□ -0.32
ABCD4-223	ENST00000555904	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.07	□□□□□ -0.32
ABCD4-223	ENST00000555904	MYH10	P35580	1976 aa		13.07	□□□□□ -0.32
ABCD4-223	ENST00000555904	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.07	□□□□□ -0.32
ABCD4-223	ENST00000555904		A0A0A6YYK5	440 aa	Predicted RBP	13.07	□□□□□ -0.32
ABCD4-223	ENST00000555904	C2orf78	A6NCI8	922 aa		13.07	□□□□□ -0.32
ABCD4-223	ENST00000555904	MYO1F	O00160	1098 aa		13.07	□□□□□ -0.32
ABCD4-223	ENST00000555904	COCH	O43405	550 aa		13.07	□□□□□ -0.32
ABCD4-223	ENST00000555904	OAS1	P00973	400 aa	Known RBP	13.07	□□□□□ -0.32
ABCD4-223	ENST00000555904	CEBPB	P17676	345 aa		13.07	□□□□□ -0.32

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