RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 WDR49Q8IV35 697 aa20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 ZCCHC9Q8N567 271 aaKnown RBP20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 TMX3Q96JJ7 454 aa20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 CLIC6Q96NY7 704 aa20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 PANK4Q9NVE7 773 aa20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 SUSD2Q9UGT4 822 aa20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 CLIC4Q9Y696 253 aa20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 SETXQ7Z333 2677 aaKnown RBP20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 FRMD3A2A2Y4 597 aa20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 CACNG3O60359 315 aa20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 RTN3O95197 1032 aaPredicted RBP20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 CD2BP2O95400 341 aaKnown RBP20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 DLATP10515 647 aaKnown RBP20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 TYRP14679 529 aa20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 SLC5A3P53794 718 aa20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 BNC1Q01954 994 aa20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 WDR72Q3MJ13 1102 aa20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 SNX30Q5VWJ9 437 aa20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 PAQR9Q6ZVX9 377 aa20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 RDH13Q8NBN7 331 aa20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 OVCA2Q8WZ82 227 aa20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 P2RY11Q96G91 374 aa20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 BBS2Q9BXC9 721 aa20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 MIR1-1HGQ9H1L0 117 aa20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 TOR4AQ9NXH8 423 aa20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 HSPBP1Q9NZL4 362 aa20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 CCDC39Q9UFE4 941 aa20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 FBXO2Q9UK22 296 aaPredicted RBP20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 FNDC3AQ9Y2H6 1198 aaKnown RBP20.1■□□□□ 0.81
SUPT16H-203ENST00000555752 MEI4A8MW99 385 aa20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 TBX18O95935 607 aa20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 ATXN1LP0C7T5 689 aaKnown RBP20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 ZDHHC11BP0C7U3 371 aa20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 CD6P30203 668 aa20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 HOXD13P35453 343 aa20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 TNNC1P63316 161 aa20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 ALCAMQ13740 583 aa20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 WDR45BQ5MNZ6 344 aa20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 FAM35AQ86V20 835 aa20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 SCFD1Q8WVM8 642 aa20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 FOXJ1Q92949 421 aa20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 BHMTQ93088 406 aa20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 ELMO3Q96BJ8 720 aa20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 TOE1Q96GM8 510 aaKnown RBP20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 PANK2Q9BZ23 570 aa20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 NACA2Q9H009 215 aa20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 GAREM1Q9H706 876 aa20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 NXF1Q9UBU9 619 aaKnown RBP20.09■□□□□ 0.81
SUPT16H-203ENST00000555752 A0A087X0B3 334 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 A0A1B0GTW7 788 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 GOLGA8CPA6NN73 597 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 KCNJ18B7U540 433 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 TUBP50607 506 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 CDH8P55286 799 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 MYL6P60660 151 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 SURF1Q15526 300 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 TMPRSS7Q7RTY8 843 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 DNASE2BQ8WZ79 361 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 CCDC127Q96BQ5 260 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 DUSP9Q99956 384 aaKnown RBP20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 MED10Q9BTT4 135 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 GPR174Q9BXC1 333 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 KLF16Q9BXK1 252 aaPredicted RBP20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 ZDHHC5Q9C0B5 715 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 SMYD3Q9H7B4 428 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 PRDM16Q9HAZ2 1276 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 SCUBE2Q9NQ36 999 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 PLK2Q9NYY3 685 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 IL37Q9NZH6 218 aa20.08■□□□□ 0.81
SUPT16H-203ENST00000555752 URB1O60287 2271 aaKnown RBP20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 KIAA0391O15091 583 aaKnown RBP20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 TLR5O60602 858 aa20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 CILPO75339 1184 aa20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 CISD3P0C7P0 127 aa20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 NCAM1P13591 858 aa20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 TNNI1P19237 187 aa20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 CYP4F3Q08477 520 aa20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 FUT11Q495W5 492 aa20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 LARP1BQ659C4 914 aaKnown RBP20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 HTR3DQ70Z44 454 aa20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 ZMIZ2Q8NF64 920 aa20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 BAHD1Q8TBE0 780 aaPredicted RBP20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 ZNF516Q92618 1163 aa20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 COL26A1Q96A83 441 aa20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 XPO6Q96QU8 1125 aaKnown RBP20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 MKRN2Q9H000 416 aaKnown RBP20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 TM7SF3Q9NS93 570 aa20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 WSB2Q9NYS7 404 aaPredicted RBP20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 KIAA1522Q9P206 1035 aaPredicted RBP20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 STON1Q9Y6Q2 735 aa20.07■□□□□ 0.8
SUPT16H-203ENST00000555752 FAM149AA5PLN7 773 aa20.06■□□□□ 0.8
SUPT16H-203ENST00000555752 BEST1O76090 585 aa20.06■□□□□ 0.8
SUPT16H-203ENST00000555752 PRB1P04280 392 aa20.06■□□□□ 0.8
SUPT16H-203ENST00000555752 DGKGP49619 791 aa20.06■□□□□ 0.8
SUPT16H-203ENST00000555752 SNRNP35Q16560 246 aaKnown RBP20.06■□□□□ 0.8
SUPT16H-203ENST00000555752 DCAF12L1Q5VU92 463 aa20.06■□□□□ 0.8
SUPT16H-203ENST00000555752 BRAPQ7Z569 592 aa20.06■□□□□ 0.8
SUPT16H-203ENST00000555752 CGRRF1Q99675 332 aa20.06■□□□□ 0.8
SUPT16H-203ENST00000555752 GZF1Q9H116 711 aaPredicted RBP20.06■□□□□ 0.8
SUPT16H-203ENST00000555752 XYLT2Q9H1B5 865 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms