RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 EMILIN2Q9BXX0 1053 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 FBXO44Q9H4M3 255 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 ZWILCHQ9H900 591 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 GMIPQ9P107 970 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 MSRAQ9UJ68 235 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 CDC23Q9UJX2 597 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 SCML2Q9UQR0 700 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 YIPF1Q9Y548 306 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 PCDHA3Q9Y5H8 950 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 IRAK3Q9Y616 596 aa10.67□□□□□ -0.7
SRP54-208ENST00000555557 CCDC66A2RUB6 948 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 EPOPA6NHQ4 379 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 MIF4GDA9UHW6 222 aaKnown RBP10.66□□□□□ -0.7
SRP54-208ENST00000555557 RFXAPO00287 272 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 DPYSL4O14531 572 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 FSCN2O14926 492 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 PER2O15055 1255 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 SART1O43290 800 aaKnown RBP10.66□□□□□ -0.7
SRP54-208ENST00000555557 ADH1AP07327 375 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 GLI1P08151 1106 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 PRLRP16471 622 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 TCP1P17987 556 aaKnown RBP10.66□□□□□ -0.7
SRP54-208ENST00000555557 CTNNA2P26232 953 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 NOS2P35228 1153 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 ALDH1A3P47895 512 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 SULT1E1P49888 294 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 HDAC4P56524 1084 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 CREMQ03060 361 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 HABP4Q5JVS0 413 aaKnown RBP10.66□□□□□ -0.7
SRP54-208ENST00000555557 ZFYVE27Q5T4F4 411 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 OTUD1Q5VV17 481 aaPredicted RBP10.66□□□□□ -0.7
SRP54-208ENST00000555557 LILRA6Q6PI73 481 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 CHRDL2Q6WN34 429 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 ARCQ7LC44 396 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 RBM23Q86U06 439 aaKnown RBP10.66□□□□□ -0.7
SRP54-208ENST00000555557 CREG2Q8IUH2 290 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 RHOT1Q8IXI2 618 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 SCML4Q8N228 414 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 UBL4BQ8N7F7 174 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 SLC7A14Q8TBB6 771 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 GOLGA1Q92805 767 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 FBXO32Q969P5 355 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 PEBP4Q96S96 227 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 L2HGDHQ9H9P8 463 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 SLC28A3Q9HAS3 691 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 IL37Q9NZH6 218 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 COLQQ9Y215 455 aaPredicted RBP10.66□□□□□ -0.7
SRP54-208ENST00000555557 GBF1Q92538 1859 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 M0QYT0 321 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 PDE2AO00408 941 aaPredicted RBP10.66□□□□□ -0.7
SRP54-208ENST00000555557 RIOK3O14730 519 aaKnown RBP10.66□□□□□ -0.7
SRP54-208ENST00000555557 CEP104O60308 925 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 RTN3O95197 1032 aaPredicted RBP10.66□□□□□ -0.7
SRP54-208ENST00000555557 PYGMP11217 842 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 BMP8BP34820 402 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 PTPN9P43378 593 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 SLC25A11Q02978 314 aaKnown RBP10.66□□□□□ -0.7
SRP54-208ENST00000555557 NME3Q13232 169 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 RAB30Q15771 203 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 SLC25A52Q3SY17 297 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 BTBD8Q5XKL5 378 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 TCEAL8Q8IYN2 117 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 LRRN4CLQ8ND94 238 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 GDPD5Q8WTR4 605 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 CENPIQ92674 756 aaPredicted RBP10.66□□□□□ -0.7
SRP54-208ENST00000555557 SAMD11Q96NU1 681 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 NPY6RQ99463 290 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 CARD6Q9BX69 1037 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 MAGEB5Q9BZ81 275 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 HSFX1Q9UBD0 423 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 LCMT1Q9UIC8 334 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 USP18Q9UMW8 372 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 INSL5Q9Y5Q6 135 aa10.66□□□□□ -0.7
SRP54-208ENST00000555557 SZT2Q5T011 3432 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 FAM92AA1XBS5 289 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 PI4K2BG5E9Z4 385 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 LPXNO60711 386 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 TRUB2O95900 331 aaKnown RBP10.65□□□□□ -0.7
SRP54-208ENST00000555557 TBX18O95935 607 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 GLUD1P00367 558 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 HMGA1P17096 107 aaKnown RBP10.65□□□□□ -0.7
SRP54-208ENST00000555557 PCK1P35558 622 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 CLCN4P51793 760 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 RWDD2BP57060 319 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 ACAP1Q15027 740 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 CYP4V2Q6ZWL3 525 aaPredicted RBP10.65□□□□□ -0.7
SRP54-208ENST00000555557 ANKS1BQ7Z6G8 1248 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 MON1AQ86VX9 555 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 FAM131BQ86XD5 332 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 KREMEN2Q8NCW0 462 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 NT5C3BQ969T7 300 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 RNF25Q96BH1 459 aaPredicted RBP10.65□□□□□ -0.7
SRP54-208ENST00000555557 TMPRSS4Q9NRS4 437 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 ABCC13Q9NSE7 274 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 GPATCH2LQ9NWQ4 482 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 SFMBT1Q9UHJ3 866 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 FBXW11Q9UKB1 542 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 STAP1Q9ULZ2 295 aa10.65□□□□□ -0.7
SRP54-208ENST00000555557 MDM4O15151 490 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 PSTPIP1O43586 416 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms