RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 SFRP4Q6FHJ7 346 aaPredicted RBP6.23□□□□□ -1.41
VRK1-205ENST00000555402 RGS7BPQ6MZT1 257 aaPredicted RBP6.23□□□□□ -1.41
VRK1-205ENST00000555402 MZT2AQ6P582 158 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 ADGRG5Q8IZF4 528 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 FAM9AQ8IZU1 332 aaPredicted RBP6.23□□□□□ -1.41
VRK1-205ENST00000555402 GCC1Q96CN9 775 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 UROC1Q96N76 676 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 FAM167BQ9BTA0 163 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 SLC25A32Q9H2D1 315 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 CXorf36Q9H7Y0 433 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 GBA2Q9HCG7 927 aaPredicted RBP6.23□□□□□ -1.41
VRK1-205ENST00000555402 A0A0B4J269 797 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 A0A1W2PS29 197 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 IRAK2O43187 625 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 KCNAB3O43448 404 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 FOXO1Q12778 655 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 TUBB3Q13509 450 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 HLXQ14774 488 aaPredicted RBP6.22□□□□□ -1.41
VRK1-205ENST00000555402 GEN1Q17RS7 908 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 SLC5A9Q2M3M2 681 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 KIAA1614Q5VZ46 1190 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 SULT6B1Q6IMI4 303 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 JMJD6Q6NYC1 403 aaPredicted RBP6.22□□□□□ -1.41
VRK1-205ENST00000555402 KLHL17Q6TDP4 642 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 RFX8Q6ZV50 586 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 PTF1AQ7RTS3 328 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 CCDC117Q8IWD4 279 aaPredicted RBP6.22□□□□□ -1.41
VRK1-205ENST00000555402 GALNT15Q8N3T1 639 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 Q8NA96 180 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 PNISRQ8TF01 805 aaKnown RBP6.22□□□□□ -1.41
VRK1-205ENST00000555402 TMEM171Q8WVE6 324 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 DDB2Q92466 427 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 WASF1Q92558 559 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 NACC2Q96BF6 587 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 GRAMD1AQ96CP6 724 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 NELL2Q99435 816 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 EPS8L2Q9H6S3 715 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 TMEM8AQ9HCN3 771 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 ITM2CQ9NQX7 267 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 SERTAD3Q9UJW9 196 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 SCAF8Q9UPN6 1271 aaKnown RBP6.22□□□□□ -1.41
VRK1-205ENST00000555402 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.22□□□□□ -1.41
VRK1-205ENST00000555402 SPATA31A3Q5VYP0 1347 aa6.22□□□□□ -1.41
VRK1-205ENST00000555402 M0R3H8 397 aa6.21□□□□□ -1.42
VRK1-205ENST00000555402 FCHO1O14526 889 aa6.21□□□□□ -1.42
VRK1-205ENST00000555402 ITGA2BP08514 1039 aa6.21□□□□□ -1.42
VRK1-205ENST00000555402 VEGFAP15692 232 aaPredicted RBP6.21□□□□□ -1.42
VRK1-205ENST00000555402 YY1P25490 414 aa6.21□□□□□ -1.42
VRK1-205ENST00000555402 PPIFP30405 207 aaKnown RBP6.21□□□□□ -1.42
VRK1-205ENST00000555402 NSUN2Q08J23 767 aaKnown RBP eCLIP6.21□□□□□ -1.42
VRK1-205ENST00000555402 GPS1Q13098 491 aa6.21□□□□□ -1.42
VRK1-205ENST00000555402 CYP2A13Q16696 494 aa6.21□□□□□ -1.42
VRK1-205ENST00000555402 MANEALQ5VSG8 457 aa6.21□□□□□ -1.42
VRK1-205ENST00000555402 ICE2Q659A1 982 aa6.21□□□□□ -1.42
VRK1-205ENST00000555402 TMPRSS9Q7Z410 1059 aa6.21□□□□□ -1.42
VRK1-205ENST00000555402 RASGRP3Q8IV61 690 aa6.21□□□□□ -1.42
VRK1-205ENST00000555402 COLGALT2Q8IYK4 626 aa6.21□□□□□ -1.42
VRK1-205ENST00000555402 PTCD3Q96EY7 689 aaKnown RBP6.21□□□□□ -1.42
VRK1-205ENST00000555402 ZSCAN31Q96LW9 406 aaPredicted RBP6.21□□□□□ -1.42
VRK1-205ENST00000555402 KATNAL1Q9BW62 490 aa6.21□□□□□ -1.42
VRK1-205ENST00000555402 TPSD1Q9BZJ3 242 aa6.21□□□□□ -1.42
VRK1-205ENST00000555402 UBA5Q9GZZ9 404 aa6.21□□□□□ -1.42
VRK1-205ENST00000555402 RRN3Q9NYV6 651 aa6.21□□□□□ -1.42
VRK1-205ENST00000555402 C9orf78Q9NZ63 289 aaPredicted RBP6.21□□□□□ -1.42
VRK1-205ENST00000555402 DNAJB11Q9UBS4 358 aa6.21□□□□□ -1.42
VRK1-205ENST00000555402 HERC5Q9UII4 1024 aaKnown RBP6.21□□□□□ -1.42
VRK1-205ENST00000555402 IPO5O00410 1097 aaKnown RBP6.2□□□□□ -1.42
VRK1-205ENST00000555402 SNX2O60749 519 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 GLP2RO95838 553 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 ITGA5P08648 1049 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 HGFP14210 728 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 NPPBP16860 134 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 MST1P26927 711 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 ADORA2AP29274 412 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 POLE2P56282 527 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 ARL4CP56559 192 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 CCNIQ14094 377 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 CERCAMQ5T4B2 595 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 VPS53Q5VIR6 699 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 CCDC70Q6NSX1 233 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 GRASPQ7Z6J2 395 aaPredicted RBP6.2□□□□□ -1.42
VRK1-205ENST00000555402 ATRIPQ8WXE1 791 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 DPF1Q92782 380 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 ZBTB9Q96C00 473 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 ZNF668Q96K58 619 aaPredicted RBP6.2□□□□□ -1.42
VRK1-205ENST00000555402 ZBTB45Q96K62 511 aaPredicted RBP6.2□□□□□ -1.42
VRK1-205ENST00000555402 FAM227BQ96M60 508 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 HIST1H2AAQ96QV6 131 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 TIMP4Q99727 224 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 TRIM5Q9C035 493 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 ZCWPW1Q9H0M4 648 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 KCTD5Q9NXV2 234 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 SAGE1Q9NXZ1 904 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 CA14Q9ULX7 337 aa6.2□□□□□ -1.42
VRK1-205ENST00000555402 TRGV11A0A075B6L2 103 aa6.19□□□□□ -1.42
VRK1-205ENST00000555402 CD3EAPO15446 510 aaKnown RBP6.19□□□□□ -1.42
VRK1-205ENST00000555402 ZSCAN9O15535 394 aaPredicted RBP6.19□□□□□ -1.42
VRK1-205ENST00000555402 VIPP01282 170 aa6.19□□□□□ -1.42
VRK1-205ENST00000555402 GATA3P23771 443 aa6.19□□□□□ -1.42
VRK1-205ENST00000555402 PDE6CP51160 858 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms