RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 E2F8A0AVK6 867 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 TULP2O00295 520 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 SCAMP3O14828 347 aaKnown RBP12.7□□□□□ -0.38
SRP54-206ENST00000555317 SART1O43290 800 aaKnown RBP12.7□□□□□ -0.38
SRP54-206ENST00000555317 FBXO21O94952 628 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 TBX18O95935 607 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 ADH1CP00326 375 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 KRT9P35527 623 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 ACADSBP45954 432 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 ZNF165P49910 485 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 COPB1P53618 953 aaKnown RBP12.7□□□□□ -0.38
SRP54-206ENST00000555317 UBXN1Q04323 297 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 EFEMP1Q12805 493 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 GRSF1Q12849 480 aaKnown RBP eCLIP12.7□□□□□ -0.38
SRP54-206ENST00000555317 PON2Q15165 354 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 MEA1Q16626 185 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 EML3Q32P44 896 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 KLHDC7AQ5VTJ3 777 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 KLHDC10Q6PID8 442 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 MIB1Q86YT6 1006 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 RNF139Q8WU17 664 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 ZNF606Q8WXB4 792 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 OTUB2Q96DC9 234 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 HSFY1Q96LI6 401 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 NOX5Q96PH1 765 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 NMUR1Q9HB89 426 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 OLA1Q9NTK5 396 aaKnown RBP12.7□□□□□ -0.38
SRP54-206ENST00000555317 LIMA1Q9UHB6 759 aaKnown RBP12.7□□□□□ -0.38
SRP54-206ENST00000555317 MTF2Q9Y483 593 aaPredicted RBP12.7□□□□□ -0.38
SRP54-206ENST00000555317 FHOD1Q9Y613 1164 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 PIEZO1Q92508 2521 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 LGALS16A8MUM7 142 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 PIK3R2O00459 728 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 UCHL3P15374 230 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 RPS9P46781 194 aaKnown RBP12.69□□□□□ -0.38
SRP54-206ENST00000555317 PGFP49763 221 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 SNX16P57768 344 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 DRAP1Q14919 205 aaPredicted RBP12.69□□□□□ -0.38
SRP54-206ENST00000555317 FILIP1LQ4L180 1135 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 PKDCCQ504Y2 493 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 DGKKQ5KSL6 1271 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 PM20D1Q6GTS8 502 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 PMF1Q6P1K2 205 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 SCD5Q86SK9 330 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 PRSS33Q8NF86 280 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 SLC35F5Q8WV83 523 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 SPAG5Q96R06 1193 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 ZSWIM1Q9BR11 485 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 IER2Q9BTL4 223 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 LINC00597Q9H2U6 94 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 SYNCQ9H7C4 482 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 LMAN1LQ9HAT1 526 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 PLCB1Q9NQ66 1216 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 FAM207AQ9NSI2 230 aaPredicted RBP12.69□□□□□ -0.38
SRP54-206ENST00000555317 OSER1Q9NX31 292 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 MARCH2Q9P0N8 246 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 NUDT5Q9UKK9 219 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 DAAM1Q9Y4D1 1078 aa12.69□□□□□ -0.38
SRP54-206ENST00000555317 MYOFQ9NZM1 2061 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 FOXN3O00409 490 aaPredicted RBP12.68□□□□□ -0.38
SRP54-206ENST00000555317 MDM4O15151 490 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 LAMTOR5O43504 91 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 CAVIN2O95810 425 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 ZNF18P17022 549 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 GJA4P35212 333 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 COG7P83436 770 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 ZXDBP98169 803 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 KCNMA1Q12791 1236 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 PPP2R5DQ14738 602 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 ANGPT1Q15389 498 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 SYCP1Q15431 976 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 DENND1BQ6P3S1 775 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 TXNDC11Q6PKC3 985 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 PASD1Q8IV76 773 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 SCML4Q8N228 414 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 ZNF276Q8N554 614 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 NEK11Q8NG66 645 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 IRGQQ8WZA9 623 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 ATOH1Q92858 354 aaPredicted RBP12.68□□□□□ -0.38
SRP54-206ENST00000555317 CLDN23Q96B33 292 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 FAM122AQ96E09 287 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 ZFRQ96KR1 1074 aaKnown RBP12.68□□□□□ -0.38
SRP54-206ENST00000555317 P2RY13Q9BPV8 354 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 TRIM62Q9BVG3 475 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 KLF16Q9BXK1 252 aaPredicted RBP12.68□□□□□ -0.38
SRP54-206ENST00000555317 STK33Q9BYT3 514 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 DCLK3Q9C098 648 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 MIS12Q9H081 205 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 ACP6Q9NPH0 428 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 ABCC13Q9NSE7 274 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 AJAP1Q9UKB5 411 aaPredicted RBP12.68□□□□□ -0.38
SRP54-206ENST00000555317 ZNF510Q9Y2H8 683 aa12.68□□□□□ -0.38
SRP54-206ENST00000555317 WDR87Q6ZQQ6 2873 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 SLC12A8A0AV02 714 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 OTOL1A6NHN0 477 aaPredicted RBP12.67□□□□□ -0.38
SRP54-206ENST00000555317 YJEFN3A6XGL0 299 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 E7ENQ6 273 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 F8VZ95 297 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 H0Y858 1186 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 GOLGA6L19H0YKK7 550 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms