RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 LRCH4O75427 683 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 LCA5LO95447 670 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 NCF2P19878 526 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 HOXD10P28358 340 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 CPA2P48052 419 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 OGDHQ02218 1023 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 SP3Q02447 781 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 CENPCQ03188 943 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 GAD2Q05329 585 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 FOXD4Q12950 439 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 SLC39A12Q504Y0 691 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 URGCPQ8TCY9 931 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 SNRNP25Q9BV90 132 aaKnown RBP12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 ZNF518BQ9C0D4 1074 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 ZFATQ9P243 1243 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 SFMBT1Q9UHJ3 866 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 NAALADL1Q9UQQ1 740 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 MSI1O43347 362 aaKnown RBP12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 FGFR1P11362 822 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 KDELR1P24390 212 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 TYK2P29597 1187 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 BCAT1P54687 386 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 ACCSLQ4AC99 568 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 HABP4Q5JVS0 413 aaKnown RBP12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 TSHZ1Q6ZSZ6 1077 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 TMEM40Q8WWA1 233 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 FAM111AQ96PZ2 611 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 TRIM56Q9BRZ2 755 aaKnown RBP12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 ITGA11Q9UKX5 1188 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 PADI3Q9ULW8 664 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 DDX60LQ5H9U9 1706 aaKnown RBP12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 MYBPHLA2RUH7 354 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 RIPK2O43353 540 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 PSTPIP1O43586 416 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 ATXN3P54252 364 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 YWHAZP63104 245 aaKnown RBP12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 GBE1Q04446 702 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 EFTUD2Q15029 972 aaKnown RBP eCLIP12.68□□□□□ -0.381e-6■■■□□ 17.2
ARHGEF40-206ENST00000555232 UBAP2Q5T6F2 1119 aaKnown RBP12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 MSL3Q8N5Y2 521 aaKnown RBP12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 ZNF669Q96BR6 464 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 SLITRK1Q96PX8 696 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 XPO6Q96QU8 1125 aaKnown RBP12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 ADAMTSL1Q8N6G6 1762 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 SLC15A5A6NIM6 579 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 H3BRJ5 948 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 CDH16O75309 829 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 WEE1P30291 646 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 AVPR1AP37288 418 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 GLRBP48167 497 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 PTK7Q13308 1070 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 PKN2Q16513 984 aaKnown RBP12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 ANO4Q32M45 955 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 SLFN11Q7Z7L1 901 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 ATAD1Q8NBU5 361 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 TBCBQ99426 244 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 FAM105AQ9NUU6 356 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 SIX4Q9UIU6 781 aa12.68□□□□□ -0.38
ARHGEF40-206ENST00000555232 CFAP69A5D8W1 941 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 TMEM191CA6NGB0 347 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 TRIM49D1C9J1S8 452 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 KIF3CO14782 793 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 GPR182O15218 404 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 PTPN1P18031 435 aaKnown RBP12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 PCSK1P29120 753 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 RTP1P59025 263 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 DEFB115Q30KQ5 88 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 B3GNT9Q6UX72 402 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 EFHBQ8N7U6 833 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 B3GALNT2Q8NCR0 500 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 GTF3C2Q8WUA4 911 aaPredicted RBP12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 PIK3R5Q8WYR1 880 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 DEFB118Q96PH6 123 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 PAAF1Q9BRP4 392 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 FZD8Q9H461 694 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 TMBIM4Q9HC24 238 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 CNMDO75829 334 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 GSTA1P08263 222 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 GSTA2P09210 222 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 IL1R2P27930 398 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 EPHB1P54762 984 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 VCPP55072 806 aaKnown RBP12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 TAP1Q03518 808 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 BST2Q10589 180 aaKnown RBP12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 CCNG2Q16589 344 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 CTXN3Q4LDR2 81 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 BOLA3Q53S33 107 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 LVRNQ6Q4G3 990 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 MON1BQ7L1V2 547 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 SPDYE1Q8NFV5 336 aaPredicted RBP12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 NINJ2Q9NZG7 142 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 PPARGC1AQ9UBK2 798 aaKnown RBP12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 KCNH4Q9UQ05 1017 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 KRT37O76014 449 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 RARGP13631 454 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 GDF10P55107 478 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 YWHAHQ04917 246 aaPredicted RBP12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 THOC5Q13769 683 aaKnown RBP12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 RBBP5Q15291 538 aaKnown RBP12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 CA9Q16790 459 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms