RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 NACA2Q9H009 215 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 LHX5Q9H2C1 402 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 DUS2Q9NX74 493 aaKnown RBP13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 DNMT3LQ9UJW3 386 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 MTF2Q9Y483 593 aaPredicted RBP13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 DAAM1Q9Y4D1 1078 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 WNT6Q9Y6F9 365 aa13.56□□□□□ -0.24
MTHFD1-208ENST00000554739 A0A1B0GTH6 734 aa13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 E2F8A0AVK6 867 aa13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 MAN2B1O00754 1011 aa13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 MDM4O15151 490 aa13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 GREM1O60565 184 aa13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 CYP11B1P15538 503 aa13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 KRT9P35527 623 aa13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 SOX9P48436 509 aa13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 KPNA1P52294 538 aaPredicted RBP13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 NR1I3Q14994 352 aa13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 BSPRYQ5W0U4 402 aa13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 TADA2BQ86TJ2 420 aa13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 RALGPS2Q86X27 583 aaPredicted RBP13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 DDX42Q86XP3 938 aaKnown RBP eCLIP13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 NEK11Q8NG66 645 aa13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 IRGQQ8WZA9 623 aa13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 DDX1Q92499 740 aaKnown RBP13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 CDK5RAP1Q96SZ6 601 aaKnown RBP13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 FOXQ1Q9C009 403 aa13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 C8orf33Q9H7E9 229 aaPredicted RBP13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 NLRC4Q9NPP4 1024 aa13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 SIT1Q9Y3P8 196 aa13.55□□□□□ -0.24
MTHFD1-208ENST00000554739 F5P12259 2224 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 FAM170BA6NMN3 283 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 SPECC1L-ADORA2AF8WAN1 911 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 SCAMP3O14828 347 aaKnown RBP13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 FBXO21O94952 628 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 ACADSBP45954 432 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 IFNAR2P48551 515 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 PDCLQ13371 301 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 FZD5Q13467 585 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 FILIP1LQ4L180 1135 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 BTBD8Q5XKL5 378 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 TXNDC11Q6PKC3 985 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 HTR3DQ70Z44 454 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 NOP9Q86U38 636 aaKnown RBP13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 PASD1Q8IV76 773 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 PJA1Q8NG27 643 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 CLEC4CQ8WTT0 213 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 ATP2A3Q93084 1043 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 CHFRQ96EP1 664 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 MSANTD3Q96H12 275 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 OSBPL6Q9BZF3 934 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 MIS12Q9H081 205 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 ECT2Q9H8V3 914 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 LTB4R2Q9NPC1 389 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 ST7Q9NRC1 585 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 ABCC13Q9NSE7 274 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 DLGAP2Q9P1A6 1054 aa13.54□□□□□ -0.24
MTHFD1-208ENST00000554739 OBSL1O75147 1896 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 A0A1W2PQC6 194 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 SLC9A3R1O14745 358 aaPredicted RBP13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 PAPSS1O43252 624 aaPredicted RBP13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 GFPT2O94808 682 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 SERPINC1P01008 464 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 FYNP06241 537 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 TARSP26639 723 aaKnown RBP13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 CTHP32929 405 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 SOX5P35711 763 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 STAT1P42224 750 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 TPM4P67936 248 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 FANCCQ00597 558 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 EFEMP1Q12805 493 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 UBXN2BQ14CS0 331 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 C1orf228Q6PIY5 440 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 LRSAM1Q6UWE0 723 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 MIB1Q86YT6 1006 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 CCDC105Q8IYK2 499 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 CPA6Q8N4T0 437 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 EPS8L1Q8TE68 723 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 FAM3CQ92520 227 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 EDEM1Q92611 657 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 CLDN23Q96B33 292 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 PPP1R13BQ96KQ4 1090 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 TBC1D14Q9P2M4 693 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 MRPS17Q9Y2R5 130 aaKnown RBP13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 SH3BP1Q9Y3L3 701 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 COL4A3Q01955 1670 aa13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 NUP210Q8TEM1 1887 aaPredicted RBP13.53□□□□□ -0.24
MTHFD1-208ENST00000554739 DENND4CQ5VZ89 1909 aa13.52□□□□□ -0.24
MTHFD1-208ENST00000554739 MUC6Q6W4X9 2439 aa13.52□□□□□ -0.24
MTHFD1-208ENST00000554739 E5RJQ4 531 aa13.52□□□□□ -0.25
MTHFD1-208ENST00000554739 GOLGA6L19H0YKK7 550 aa13.52□□□□□ -0.25
MTHFD1-208ENST00000554739 NFATC1O95644 943 aa13.52□□□□□ -0.25
MTHFD1-208ENST00000554739 DCNP07585 359 aaKnown RBP13.52□□□□□ -0.25
MTHFD1-208ENST00000554739 IRF1P10914 325 aa13.52□□□□□ -0.25
MTHFD1-208ENST00000554739 CHRNB2P17787 502 aa13.52□□□□□ -0.25
MTHFD1-208ENST00000554739 CDH5P33151 784 aaPredicted RBP13.52□□□□□ -0.25
MTHFD1-208ENST00000554739 GJA4P35212 333 aa13.52□□□□□ -0.25
MTHFD1-208ENST00000554739 NUBP1P53384 320 aa13.52□□□□□ -0.25
MTHFD1-208ENST00000554739 COG7P83436 770 aa13.52□□□□□ -0.25
MTHFD1-208ENST00000554739 TAF3Q5VWG9 929 aa13.52□□□□□ -0.25
MTHFD1-208ENST00000554739 RHBDF2Q6PJF5 856 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms