RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 YTHDF3Q7Z739 585 aaKnown RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 ACOT1Q86TX2 421 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 FAM9CQ8IZT9 166 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 SEPT5Q99719 369 aaPredicted RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 CINPQ9BW66 212 aaPredicted RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 MMADHCQ9H3L0 296 aaPredicted RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 GPATCH2LQ9NWQ4 482 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 NWD1Q149M9 1564 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 C2orf81A6NN90 581 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 MAP3K6O95382 1288 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 RARAP10276 462 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 HARS2P49590 506 aaKnown RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 GLB1LQ6UWU2 654 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 MSL3Q8N5Y2 521 aaKnown RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 KYQ8NBH2 561 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 CENPTQ96BT3 561 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 OXNAD1Q96HP4 312 aaPredicted RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 TMEM176AQ96HP8 235 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 ZDHHC15Q96MV8 337 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 MYOZ2Q9NPC6 264 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 AVENQ9NQS1 362 aaPredicted RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 SAR1AQ9NR31 198 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 PIK3C2BO00750 1634 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 SERPINE1P05121 402 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 ODC1P11926 461 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 PTPN11Q06124 597 aaPredicted RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 KRR1Q13601 381 aaKnown RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 TRIP4Q15650 581 aaPredicted RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 PACS2Q86VP3 889 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 FLCNQ8NFG4 579 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 GLMNQ92990 594 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 NMD3Q96D46 503 aaKnown RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 ZFP42Q96MM3 310 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 SMAD5Q99717 465 aaKnown RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 TRIM8Q9BZR9 551 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 AGO4Q9HCK5 861 aaKnown RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 CHST12Q9NRB3 414 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 PAPOLBQ9NRJ5 636 aaKnown RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 CLTCQ00610 1675 aaKnown RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 COL3A1P02461 1466 aaPredicted RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 FCHO1O14526 889 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 VPS26AO75436 327 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 IFI35P80217 286 aaPredicted RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 ORC1Q13415 861 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 FUT11Q495W5 492 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 SNX30Q5VWJ9 437 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 TSEN2Q8NCE0 465 aaKnown RBP14.37□□□□□ -0.11
VTI1B-204ENST00000554659 TCP10LQ8TDR4 215 aa14.37□□□□□ -0.11
VTI1B-204ENST00000554659 MAGEB16A2A368 324 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 FBXO21O94952 628 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 BMPR2Q13873 1038 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 NFYCQ13952 458 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 CCDC153Q494R4 210 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 TLK2Q86UE8 772 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 DEFB107AQ8IZN7 70 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 AGBL3Q8NEM8 1001 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 RXFP2Q8WXD0 754 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 USP13Q92995 863 aaPredicted RBP14.36□□□□□ -0.11
VTI1B-204ENST00000554659 RMND5AQ9H871 391 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 CNGB3Q9NQW8 809 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 CACNA2D2Q9NY47 1150 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 NCAM2O15394 837 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 AP1G2O75843 785 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 RPS12P25398 132 aaKnown RBP14.36□□□□□ -0.11
VTI1B-204ENST00000554659 GLRBP48167 497 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 ST8SIA6P61647 398 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 PSMC6P62333 389 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 INTS5Q6P9B9 1019 aaKnown RBP14.36□□□□□ -0.11
VTI1B-204ENST00000554659 ACER1Q8TDN7 264 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 SLITRK1Q96PX8 696 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 TBCBQ99426 244 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 CRLS1Q9UJA2 301 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 TSC22D2O75157 780 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 FAM58BPP0C7Q3 252 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 ALADP13716 330 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 SOAT1P35610 550 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 PRKAA2P54646 552 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 MYL6P60660 151 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 MMRN1Q13201 1228 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 ANGEL2Q5VTE6 544 aaKnown RBP14.36□□□□□ -0.11
VTI1B-204ENST00000554659 BNIPLQ7Z465 357 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 DNAAF5Q86Y56 855 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 RERGLQ9H628 205 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 PIDD1Q9HB75 910 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 TCF7L2Q9NQB0 619 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 THAP1Q9NVV9 213 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 ZNF446Q9NWS9 450 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 SESN1Q9Y6P5 492 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 ITSN1Q15811 1721 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 ELK3P41970 407 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 CAPZA2P47755 286 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 MGAT5BQ3V5L5 792 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 C10orf120Q5SQS8 335 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 PLEKHA7Q6IQ23 1121 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 ZBTB49Q6ZSB9 765 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 CCDC149Q6ZUS6 474 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.36□□□□□ -0.11
VTI1B-204ENST00000554659 SLC22A9Q8IVM8 553 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 BLOC1S5Q8TDH9 187 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 PARK7Q99497 189 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms