RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 PPP1R10Q96QC0 940 aaKnown RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 PLIN2Q99541 437 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 PRMT1Q99873 361 aaKnown RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 TEX13BQ9BXU2 312 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 TRIM7Q9C029 511 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 POLR3FQ9H1D9 316 aaPredicted RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 RSAD1Q9HA92 442 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 TREX1Q9NSU2 369 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 TXLNGQ9NUQ3 528 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 IL1RAPL1Q9NZN1 696 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 CD300AQ9UGN4 299 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 DNPEPQ9ULA0 475 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 CCPG1Q9ULG6 757 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 NOTCH4Q99466 2003 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 ATMINO43313 823 aaPredicted RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 CST3P01034 146 aaPredicted RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 CYP2C8P10632 490 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 RALAP11233 206 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 PECAM1P16284 738 aaPredicted RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 ELF1P32519 619 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 GDF10P55107 478 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 SNAPC2Q13487 334 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 SLC5A9Q2M3M2 681 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 DCAF4L1Q3SXM0 396 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 ZNF394Q53GI3 561 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 KIAA0319Q5VV43 1072 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 TXNRD3NBQ6F5E7 133 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 CCSAPQ6IQ19 270 aaPredicted RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 MSANTD2Q6P1R3 559 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 TRAF7Q6Q0C0 670 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 MFSD7Q6UXD7 560 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 ANKRD23Q86SG2 305 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 PGBD3Q8N328 593 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 TOP6BLQ8N6T0 577 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 SLC43A3Q8NBI5 491 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 HMGCLL1Q8TB92 370 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 CAGE1Q8TC20 777 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 AGAP11Q8TF27 550 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 SERAC1Q96JX3 654 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 C8orf37Q96NL8 207 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 PLVAPQ9BX97 442 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 GCOM2Q9BZD3 368 aaPredicted RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 FHDC1Q9C0D6 1143 aaPredicted RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 NSRP1Q9H0G5 558 aaKnown RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 WDR6Q9NNW5 1121 aaKnown RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.59□□□□□ -1.839e-7■■■■□ 22.5
SEC23A-207ENST00000554615 ASIC5Q9NY37 505 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 STOML2Q9UJZ1 356 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 AGO2Q9UKV8 859 aaKnown RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 AGTPBP1Q9UPW5 1226 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 ZCWPW2A0A1B0GU75 182 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 ERI2A8K979 691 aaKnown RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 TCP10L2B9ZVM9 353 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 NDUFAB1O14561 156 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 ACOT8O14734 319 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 GSC2O15499 205 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 CA12O43570 354 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 TBC1D4O60343 1298 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 TSPAN1O60635 241 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 TM7SF2O76062 418 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 SUPT7LO94864 414 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 PAPSS2O95340 614 aaPredicted RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 SEMG1P04279 462 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 FYNP06241 537 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 KRT13P13646 458 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 ARCN1P48444 511 aaKnown RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 SERPINB9P50453 376 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 CDK7P50613 346 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 MNAT1P51948 309 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 KCNQ4P56696 695 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 NAA20P61599 178 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 TNFAIP2Q03169 654 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 GALNT2Q10471 571 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 PCLAFQ15004 111 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 ZBTB41Q5SVQ8 909 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 ANKRD22Q5VYY1 191 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 PDSS2Q86YH6 399 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 PHYKPLQ8IUZ5 450 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 HERC6Q8IVU3 1022 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 FAM217AQ8IXS0 508 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 STKLD1Q8NE28 680 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 POMGNT1Q8WZA1 660 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 PTPRN2Q92932 1015 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 MS4A4AQ96JQ5 239 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 MYCBPQ99417 103 aaPredicted RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 POP1Q99575 1024 aaKnown RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 PSD2Q9BQI7 771 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 BTBD10Q9BSF8 475 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 KIFC1Q9BW19 673 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 TMEM39BQ9GZU3 492 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 CDT1Q9H211 546 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 GOLPH3Q9H4A6 298 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 MROH8Q9H579 483 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 RPAP3Q9H6T3 665 aaPredicted RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 GPRC5DQ9NZD1 345 aa3.59□□□□□ -1.83
SEC23A-207ENST00000554615 NKX1-2Q9UD57 310 aaPredicted RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 IPO11Q9UI26 975 aaKnown RBP3.59□□□□□ -1.83
SEC23A-207ENST00000554615 ADAMTS9Q9P2N4 1935 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 KAT6AQ92794 2004 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms