RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 TNIP1Q15025 636 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 ARHGAP44Q17R89 818 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 TRIM71Q2Q1W2 868 aaKnown RBP4.76□□□□□ -1.65
ATXN3-227ENST00000554491 FAM214AQ32MH5 1076 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 C1orf141Q5JVX7 400 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 TLDC1Q6P9B6 456 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 ZNF804AQ7Z570 1209 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 BMP8AQ7Z5Y6 402 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 DDX53Q86TM3 631 aaKnown RBP4.76□□□□□ -1.65
ATXN3-227ENST00000554491 CARNMT1Q8N4J0 409 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 LINC00469Q8N7U9 141 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 CCDC112Q8NEF3 446 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 MDGA1Q8NFP4 955 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 TNIP2Q8NFZ5 429 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 PPP1R14CQ8TAE6 165 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 CCDC110Q8TBZ0 833 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 KIAA1524Q8TCG1 905 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 RPGRQ92834 1020 aaKnown RBP4.76□□□□□ -1.65
ATXN3-227ENST00000554491 ATP6V0A1Q93050 837 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 ZKSCAN4Q969J2 545 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-227ENST00000554491 LENG9Q96B70 501 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 TBC1D20Q96BZ9 403 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 SPDL1Q96EA4 605 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 CFAP36Q96G28 342 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 C1orf74Q96LT6 269 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 CLUHP3Q96NS8 147 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 CTAGE1Q96RT6 745 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 TUBGCP5Q96RT8 1024 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 SRPK1Q96SB4 655 aaKnown RBP4.76□□□□□ -1.65
ATXN3-227ENST00000554491 EIF2AQ9BY44 585 aaKnown RBP4.76□□□□□ -1.65
ATXN3-227ENST00000554491 DNAI2Q9GZS0 605 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 OSBPL5Q9H0X9 879 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-227ENST00000554491 PCIF1Q9H4Z3 704 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 TTC12Q9H892 705 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-227ENST00000554491 ZWILCHQ9H900 591 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 ATP6V0A4Q9HBG4 840 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 PARVGQ9HBI0 331 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 ACSS2Q9NR19 701 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 CCPG1Q9ULG6 757 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 RABGAP1Q9Y3P9 1069 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 PCDHGB3Q9Y5G1 929 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.76□□□□□ -1.65
ATXN3-227ENST00000554491 COL4A3BPQ9Y5P4 624 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 PTCH2Q9Y6C5 1203 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 NUP98P52948 1817 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 ABCC12Q96J65 1359 aa4.76□□□□□ -1.65
ATXN3-227ENST00000554491 SSC5DA1L4H1 1573 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 CACNA1AO00555 2505 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 SCN9AQ15858 1988 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 CCDC163A0A0D9SF12 145 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 TSPAN1O60635 241 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 CAMTA2O94983 1202 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 JUNP05412 331 aaKnown RBP4.75□□□□□ -1.65
ATXN3-227ENST00000554491 PARP1P09874 1014 aaKnown RBP4.75□□□□□ -1.65
ATXN3-227ENST00000554491 CCDC166P0CW27 439 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 IDEP14735 1019 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 EZRP15311 586 aaKnown RBP4.75□□□□□ -1.65
ATXN3-227ENST00000554491 ATP5DP30049 168 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 HSPA4P34932 840 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 KIR2DL3P43628 341 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 TRAPPC10P48553 1259 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 PMS2P54278 862 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 BASP1P80723 227 aaKnown RBP4.75□□□□□ -1.65
ATXN3-227ENST00000554491 CDK17Q00537 523 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 AMPD3Q01432 767 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 CXCL9Q07325 125 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 RAPGEF1Q13905 1077 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 ZNF460Q14592 562 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 SMC1AQ14683 1233 aaKnown RBP4.75□□□□□ -1.65
ATXN3-227ENST00000554491 KCNB1Q14721 858 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 PROSER3Q2NL68 480 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 PLEKHO1Q53GL0 409 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-227ENST00000554491 VPS53Q5VIR6 699 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 LMBRD2Q68DH5 695 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-227ENST00000554491 MFSD5Q6N075 450 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 UNQ6494/PRO21346Q6UXR6 183 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 NCCRP1Q6ZVX7 275 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-227ENST00000554491 RAB11FIP4Q86YS3 637 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 WDR75Q8IWA0 830 aaKnown RBP4.75□□□□□ -1.65
ATXN3-227ENST00000554491 LSMEM2Q8N112 164 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 GALNT15Q8N3T1 639 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 TEX9Q8N6V9 391 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 SYT2Q8N9I0 419 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-227ENST00000554491 TEX19Q8NA77 164 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 LILRB1Q8NHL6 650 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-227ENST00000554491 PROKR1Q8TCW9 393 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 THAP3Q8WTV1 239 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-227ENST00000554491 LMBR1Q8WVP7 490 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 VOPP1Q96AW1 172 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 ARL8AQ96BM9 186 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 HVCN1Q96D96 273 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 FAM122AQ96E09 287 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 HOOK2Q96ED9 719 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 CEP95Q96GE4 821 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 ZNF333Q96JL9 665 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 SNX27Q96L92 541 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 CGREF1Q99674 301 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 TCP11L1Q9NUJ3 509 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 KCTD5Q9NXV2 234 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 CIDEBQ9UHD4 219 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms