RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 CYBBP04839 570 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 MPOP05164 745 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 PRKCBP05771 671 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 PYGMP11217 842 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 COL6A2P12110 1019 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 POU3F2P20265 443 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-212ENST00000554486 FGFR4P22455 802 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 CCNE1P24864 410 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 EFNA5P52803 228 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 STX17P56962 302 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 CDC42EP1Q00587 391 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 IQCB1Q15051 598 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 MAPK6Q16659 721 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 FAM187BQ17R55 369 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 KNOP1Q1ED39 458 aaKnown RBP6.85□□□□□ -1.31
SCFD1-212ENST00000554486 CT47A1Q5JQC4 288 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-212ENST00000554486 ANKRD40Q6AI12 368 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 TTI2Q6NXR4 508 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 SLC39A4Q6P5W5 647 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 PAQR3Q6TCH7 311 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 STXBP4Q6ZWJ1 553 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 OTOP3Q7RTS5 596 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 SRGAP1Q7Z6B7 1085 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 RSPH3Q86UC2 560 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 THNSL2Q86YJ6 484 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 ZBTB8OSQ8IWT0 167 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 NETO2Q8NC67 525 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 PIP4K2CQ8TBX8 421 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 CAGE1Q8TC20 777 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 SH3RF2Q8TEC5 729 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 NELFBQ8WX92 580 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 DDX1Q92499 740 aaKnown RBP6.85□□□□□ -1.31
SCFD1-212ENST00000554486 P2RX5Q93086 422 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 HVCN1Q96D96 273 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 DHTKD1Q96HY7 919 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-212ENST00000554486 SCLT1Q96NL6 688 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 ACCSQ96QU6 501 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 TARS2Q9BW92 718 aaKnown RBP6.85□□□□□ -1.31
SCFD1-212ENST00000554486 GCOM2Q9BZD3 368 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-212ENST00000554486 INO80BQ9C086 356 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-212ENST00000554486 FZD8Q9H461 694 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 RWDD2AQ9UIY3 292 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 TBX21Q9UL17 535 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 GINS2Q9Y248 185 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 ATP11BQ9Y2G3 1177 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 TANC1Q9C0D5 1861 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 UMODL1Q5DID0 1318 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 TRIM43BA6NCK2 446 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 NUDT19A8MXV4 375 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 ANKRD63C9JTQ0 380 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 NPIPB6E9PJ23 425 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 M0QZ92 97 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 ACKR2O00590 384 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 PSMA7O14818 248 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 B4GALT5O43286 388 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 TSPAN1O60635 241 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 TADA3O75528 432 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 KIF20AO95235 890 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 AMY2AP04746 511 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 GHRP10912 638 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 AMY2BP19961 511 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 SCP2P22307 547 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 CFPP27918 469 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 ADSSP30520 456 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 HOXA11P31270 313 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-212ENST00000554486 ABCD1P33897 745 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 IGFALSP35858 605 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 PPP1R2P41236 205 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 SLC6A11P48066 632 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 STRN3Q13033 797 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 STIM1Q13586 685 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 LPIN1Q14693 890 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 GPNMBQ14956 572 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 EMC4Q5J8M3 183 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 FBXO47Q5MNV8 452 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 ZCCHC8Q6NZY4 707 aaKnown RBP6.84□□□□□ -1.31
SCFD1-212ENST00000554486 LRRC8DQ7L1W4 858 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 C16orf59Q7L2K0 433 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 OVCH1Q7RTY7 1134 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 FAM228AQ86W67 206 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 ZC3H7AQ8IWR0 971 aaKnown RBP6.84□□□□□ -1.31
SCFD1-212ENST00000554486 DHX40Q8IX18 779 aaKnown RBP6.84□□□□□ -1.31
SCFD1-212ENST00000554486 ZC3H3Q8IXZ2 948 aaKnown RBP6.84□□□□□ -1.31
SCFD1-212ENST00000554486 LRRC56Q8IYG6 542 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-212ENST00000554486 SYCP3Q8IZU3 236 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 FBXW5Q969U6 566 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 TRIM43Q96BQ3 446 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-212ENST00000554486 ZBTB45Q96K62 511 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-212ENST00000554486 ACO2Q99798 780 aaKnown RBP6.84□□□□□ -1.31
SCFD1-212ENST00000554486 BPIFA3Q9BQP9 254 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 ANP32EQ9BTT0 268 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 HAPLN2Q9GZV7 340 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 WNT8AQ9H1J5 351 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 HIPK3Q9H422 1215 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 EPB41L1Q9H4G0 881 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 TMEM206Q9H813 350 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 AGO3Q9H9G7 860 aaKnown RBP6.84□□□□□ -1.31
SCFD1-212ENST00000554486 ERVK-5Q9HDB9 667 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 AGPAT3Q9NRZ7 376 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 TYW1Q9NV66 732 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms