RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 OSER1Q9NX31 292 aa11.73□□□□□ -0.53
ABCD4-221ENST00000554453 HOOK1Q9UJC3 728 aaKnown RBP11.73□□□□□ -0.53
ABCD4-221ENST00000554453 MMP17Q9ULZ9 603 aa11.73□□□□□ -0.53
ABCD4-221ENST00000554453 NCOR2Q9Y618 2525 aa11.73□□□□□ -0.53
ABCD4-221ENST00000554453 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.73□□□□□ -0.53
ABCD4-221ENST00000554453 DCHS1Q96JQ0 3298 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.72□□□□□ -0.53
ABCD4-221ENST00000554453 SLC16A3O15427 465 aaKnown RBP11.72□□□□□ -0.53
ABCD4-221ENST00000554453 HOXC11O43248 304 aaPredicted RBP11.72□□□□□ -0.53
ABCD4-221ENST00000554453 EPN2O95208 641 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 RARGP13631 454 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 DGKEP52429 567 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 RAD23BP54727 409 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 CRY1Q16526 586 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 PREPLQ4J6C6 727 aaPredicted RBP11.72□□□□□ -0.53
ABCD4-221ENST00000554453 ZNF394Q53GI3 561 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 USP39Q53GS9 565 aaKnown RBP11.72□□□□□ -0.53
ABCD4-221ENST00000554453 ARHGAP17Q68EM7 881 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 PRR23CQ6ZRP0 262 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 CCDC186Q7Z3E2 898 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 SCD5Q86SK9 330 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 RASSF3Q86WH2 238 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 BBS7Q8IWZ6 715 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 CCDC33Q8N5R6 958 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 IL17RCQ8NAC3 791 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 SLC4A11Q8NBS3 891 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 TSTD1Q8NFU3 115 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 NETO1Q8TDF5 533 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 ERCC4Q92889 916 aaPredicted RBP11.72□□□□□ -0.53
ABCD4-221ENST00000554453 DHTKD1Q96HY7 919 aaPredicted RBP11.72□□□□□ -0.53
ABCD4-221ENST00000554453 NACA2Q9H009 215 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 DUSP15Q9H1R2 295 aaPredicted RBP11.72□□□□□ -0.53
ABCD4-221ENST00000554453 ARRDC1-AS1Q9H2J1 176 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 ARHGEF4Q9NR80 690 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 CISHQ9NSE2 258 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.72□□□□□ -0.53
ABCD4-221ENST00000554453 CLIC5Q9NZA1 410 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 DNMT3LQ9UJW3 386 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 CDV3Q9UKY7 258 aaKnown RBP11.72□□□□□ -0.53
ABCD4-221ENST00000554453 PCDHGA5Q9Y5G8 931 aa11.72□□□□□ -0.53
ABCD4-221ENST00000554453 A0A1W2PQH9 124 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 MED19A0JLT2 244 aaPredicted RBP11.71□□□□□ -0.53
ABCD4-221ENST00000554453 TBC1D3BA6NDS4 549 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 SLC30A4O14863 429 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 PMM2O15305 246 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 TULP3O75386 442 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 RHOBTB1O94844 696 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 TIE1P35590 1138 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 SEC13P55735 322 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 LRRC63Q05C16 580 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 CBWD6Q4V339 395 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 CBWD3Q5JTY5 395 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 PLA2G2CQ5R387 149 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 CBWD5Q5RIA9 395 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 BTBD8Q5XKL5 378 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 TMEM92Q6UXU6 159 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 NUDT18Q6ZVK8 323 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 SFTPA1Q8IWL2 248 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 NAT16Q8N8M0 369 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 ANKRD52Q8NB46 1076 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 TXNDC5Q8NBS9 432 aaKnown RBP11.71□□□□□ -0.53
ABCD4-221ENST00000554453 METTL14Q9HCE5 456 aaKnown RBP11.71□□□□□ -0.53
ABCD4-221ENST00000554453 WDR35Q9P2L0 1181 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 DEC1Q9P2X7 70 aa11.71□□□□□ -0.53
ABCD4-221ENST00000554453 ARMCX3Q9UH62 379 aaPredicted RBP11.71□□□□□ -0.53
ABCD4-221ENST00000554453 ASCC3Q8N3C0 2202 aaKnown RBP11.71□□□□□ -0.54
ABCD4-221ENST00000554453 DMXL1Q9Y485 3027 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 FRYLO94915 3013 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.7□□□□□ -0.54
ABCD4-221ENST00000554453 DCDC2BA2VCK2 349 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 DCLK1O15075 740 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 CYP26A1O43174 497 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 KLF8O95600 359 aaPredicted RBP11.7□□□□□ -0.54
ABCD4-221ENST00000554453 IRF1P10914 325 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 RALAP11233 206 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 HNRNPLP14866 589 aaKnown RBP eCLIP11.7□□□□□ -0.54
ABCD4-221ENST00000554453 PPP1R2P41236 205 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 COG7P83436 770 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 GOLGA8FQ08AF8 430 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 GOLGA8DPQ0D2H9 430 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 ANO4Q32M45 955 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 RAB41Q5JT25 222 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 EOGTQ5NDL2 527 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 C10orf120Q5SQS8 335 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 TCERG1LQ5VWI1 586 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 PM20D1Q6GTS8 502 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 FOXR2Q6PJQ5 311 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 Q6ZNB5 142 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 TADA2BQ86TJ2 420 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 C11orf74Q86VG3 221 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 ALLCQ8N6M5 410 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 SLC35C1Q96A29 364 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 JAKMIP2Q96AA8 810 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 CNOT6LQ96LI5 555 aaKnown RBP11.7□□□□□ -0.54
ABCD4-221ENST00000554453 CEP63Q96MT8 703 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 CDK5RAP1Q96SZ6 601 aaKnown RBP11.7□□□□□ -0.54
ABCD4-221ENST00000554453 ARID3AQ99856 593 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 MARK1Q9P0L2 795 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 NAGPAQ9UK23 515 aa11.7□□□□□ -0.54
ABCD4-221ENST00000554453 LSM7Q9UK45 103 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms