RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 LONRF2Q1L5Z9 754 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 MCMDC2Q4G0Z9 681 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 FBXO47Q5MNV8 452 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 UTP14CQ5TAP6 766 aaKnown RBP3.63□□□□□ -1.83
SLIRP-202ENST00000553981 ARHGEF16Q5VV41 709 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 USP17L6PQ6QN14 398 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 FAM111BQ6SJ93 734 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 ZNF662Q6ZS27 426 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 GAREM2Q75VX8 874 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 MRGPREQ86SM8 312 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 DGKHQ86XP1 1220 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 DHX37Q8IY37 1157 aaKnown RBP3.63□□□□□ -1.83
SLIRP-202ENST00000553981 ANKRD53Q8N9V6 530 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 CYP2W1Q8TAV3 490 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 SLC7A14Q8TBB6 771 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 NSUN6Q8TEA1 469 aaKnown RBP3.63□□□□□ -1.83
SLIRP-202ENST00000553981 GCDHQ92947 438 aaPredicted RBP3.63□□□□□ -1.83
SLIRP-202ENST00000553981 GFM2Q969S9 779 aaKnown RBP3.63□□□□□ -1.83
SLIRP-202ENST00000553981 RPGRIP1Q96KN7 1286 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 TTC14Q96N46 770 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 INPP4AQ96PE3 977 aaPredicted RBP3.63□□□□□ -1.83
SLIRP-202ENST00000553981 IWS1Q96ST2 819 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 YME1L1Q96TA2 773 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 FOXB1Q99853 325 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 IFIH1Q9BYX4 1025 aaKnown RBP3.63□□□□□ -1.83
SLIRP-202ENST00000553981 RIOX1Q9H6W3 641 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 HELLSQ9NRZ9 838 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 TOMM22Q9NS69 142 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 SAE1Q9UBE0 346 aaPredicted RBP3.63□□□□□ -1.83
SLIRP-202ENST00000553981 NDOR1Q9UHB4 597 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 CD207Q9UJ71 328 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 RCAN3Q9UKA8 241 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 CDY2AQ9Y6F7 541 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 CCDC171Q6TFL3 1326 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 DENND4AQ7Z401 1863 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 C2orf16Q68DN1 1984 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 EVPLQ92817 2033 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 DOCK6Q96HP0 2047 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 hCG_1642624A0A1W2PR95 340 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 PRR23AA6NEV1 266 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 C2CD4DB7Z1M9 353 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 PROB1E7EW31 1015 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 FAM20BO75063 409 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 HIP1RO75146 1068 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 KRT37O76014 449 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 PARNO95453 639 aaKnown RBP3.62□□□□□ -1.83
SLIRP-202ENST00000553981 BMP5P22003 454 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 PROZP22891 400 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 MARK3P27448 753 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 PTGS2P35354 604 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 ADRA1BP35368 520 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 IRF9Q00978 393 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 SP4Q02446 784 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 DUSP6Q16828 381 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 TMEM266Q2M3C6 531 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 TRIM61Q5EBN2 209 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 ANKRD45Q5TZF3 282 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 TMEM173Q86WV6 379 aaPredicted RBP3.62□□□□□ -1.83
SLIRP-202ENST00000553981 GSPT2Q8IYD1 628 aaKnown RBP3.62□□□□□ -1.83
SLIRP-202ENST00000553981 EFHBQ8N7U6 833 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 C12orf76Q8N812 135 aaPredicted RBP3.62□□□□□ -1.83
SLIRP-202ENST00000553981 PIBF1Q8WXW3 757 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 SEPT8Q92599 483 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 HAS1Q92839 578 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 NKD2Q969F2 451 aaPredicted RBP3.62□□□□□ -1.83
SLIRP-202ENST00000553981 VOPP1Q96AW1 172 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 EVI5LQ96CN4 794 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 IL17RAQ96F46 866 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 PGBD1Q96JS3 809 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 MAGEB10Q96LZ2 347 aaPredicted RBP3.62□□□□□ -1.83
SLIRP-202ENST00000553981 RIPOR3Q96MK2 946 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 MYL10Q9BUA6 226 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 PHF7Q9BWX1 381 aaPredicted RBP3.62□□□□□ -1.83
SLIRP-202ENST00000553981 GPR87Q9BY21 358 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 NACAP1Q9BZK3 213 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 KCNH6Q9H252 994 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 POMKQ9H5K3 350 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 ZNF287Q9HBT7 754 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 ZMYM6O95789 1325 aa3.62□□□□□ -1.83
SLIRP-202ENST00000553981 KAT6AQ92794 2004 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 TRANK1O15050 2925 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 UBE2QL1A1L167 161 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 GOLGA8BA8MQT2 603 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 KLRF2D3W0D1 207 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 ZBTB5O15062 677 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 N4BP1O75113 896 aaKnown RBP3.61□□□□□ -1.83
SLIRP-202ENST00000553981 PLEKHA8P1O95397 391 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 PRLP01236 227 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 RB1P06400 928 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 SLC3A2P08195 630 aaKnown RBP3.61□□□□□ -1.83
SLIRP-202ENST00000553981 CYP21A2P08686 494 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 GSPT1P15170 499 aaKnown RBP3.61□□□□□ -1.83
SLIRP-202ENST00000553981 ATF7P17544 494 aaPredicted RBP3.61□□□□□ -1.83
SLIRP-202ENST00000553981 RXRAP19793 462 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 TCF7P36402 384 aaPredicted RBP3.61□□□□□ -1.83
SLIRP-202ENST00000553981 NBL1P41271 181 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 NDUFV1P49821 464 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 IGBP1P78318 339 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 SIGLEC14Q08ET2 396 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 TROAPQ12815 778 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms