RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 SCN1AP35498 2009 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 MACROD2A1Z1Q3 448 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 M0QYV0 167 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 NRP1O14786 923 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 SYN3O14994 580 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 MICAL2O94851 1124 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 CALB1P05937 261 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 ADH1AP07327 375 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 PDGFRBP09619 1106 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 ABCB4P21439 1286 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 FSHRP23945 695 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 NOP2P46087 812 aaKnown RBP15.23■□□□□ 0.03
SHMT2-208ENST00000553868 BRCC3P46736 316 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 SLC8A3P57103 927 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 ORC1Q13415 861 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 MAPRE1Q15691 268 aaKnown RBP15.23■□□□□ 0.03
SHMT2-208ENST00000553868 ZNF569Q5MCW4 686 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 B3GALNT2Q8NCR0 500 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 KIF18AQ8NI77 898 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 RABGGTAQ92696 567 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 ZNF653Q96CK0 615 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 PACSIN1Q9BY11 444 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 AVENQ9NQS1 362 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-208ENST00000553868 ADAM22Q9P0K1 906 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 TRIM10Q9UDY6 481 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 ADAM28Q9UKQ2 775 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 STRIP2Q9ULQ0 834 aa15.23■□□□□ 0.03
SHMT2-208ENST00000553868 NDRG2Q9UN36 371 aaKnown RBP15.23■□□□□ 0.03
SHMT2-208ENST00000553868 LAMA1P25391 3075 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 MTCL1Q9Y4B5 1905 aaKnown RBP15.22■□□□□ 0.03
SHMT2-208ENST00000553868 A0A0U1RQJ8 604 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 CHURC1-FNTBB4DL54 471 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 GIPC1O14908 333 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 URODP06132 367 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 PTPN1P18031 435 aaKnown RBP15.22■□□□□ 0.03
SHMT2-208ENST00000553868 CASQ1P31415 396 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 FNTBP49356 437 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 LIMK1P53667 647 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 NRLP54845 237 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 YWHAHQ04917 246 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-208ENST00000553868 TCEAL1Q15170 157 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 GOLGA7BQ2TAP0 167 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 OVOS1Q6IE37 1185 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 DENND1BQ6P3S1 775 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 CD300LGQ6UXG3 332 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 RSPO2Q6UXX9 243 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-208ENST00000553868 GRASPQ7Z6J2 395 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-208ENST00000553868 OSTM1Q86WC4 334 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 ERICH1Q86X53 443 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 MCOLN2Q8IZK6 566 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 IPO4Q8TEX9 1081 aaKnown RBP15.22■□□□□ 0.03
SHMT2-208ENST00000553868 HASPINQ8TF76 798 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 UBE2Q2Q8WVN8 375 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 CPA5Q8WXQ8 436 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 SYT15Q9BQS2 421 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 ZSWIM1Q9BR11 485 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 ACBD6Q9BR61 282 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 THAP2Q9H0W7 228 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 RRAGDQ9NQL2 400 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-208ENST00000553868 HEBP1Q9NRV9 189 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 UVRAGQ9P2Y5 699 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 TSPAN16Q9UKR8 245 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 CDH7Q9ULB5 785 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 TFR2Q9UP52 801 aa15.22■□□□□ 0.03
SHMT2-208ENST00000553868 GREB1Q4ZG55 1949 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 CYSRT1A8MQ03 144 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 NCAM2O15394 837 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 CYP1A2P05177 515 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 MMP8P22894 467 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 LMO2P25791 158 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 HOXC13P31276 330 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 BCAT1P54687 386 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 HADHBP55084 474 aaKnown RBP15.21■□□□□ 0.03
SHMT2-208ENST00000553868 TSPY1Q01534 308 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 SATB1Q01826 763 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 ADCY1Q08828 1119 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 SOWAHCQ53LP3 525 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-208ENST00000553868 STPG1Q5TH74 334 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 SYT10Q6XYQ8 523 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 MON1BQ7L1V2 547 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 SYCE1Q8N0S2 351 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 FAM160A2Q8N612 972 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-208ENST00000553868 C1orf131Q8NDD1 294 aaKnown RBP15.21■□□□□ 0.03
SHMT2-208ENST00000553868 ZCCHC14Q8WYQ9 949 aaKnown RBP15.21■□□□□ 0.03
SHMT2-208ENST00000553868 ZNF592Q92610 1267 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 HNRNPABQ99729 332 aaKnown RBP15.21■□□□□ 0.03
SHMT2-208ENST00000553868 OXCT2Q9BYC2 517 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-208ENST00000553868 ADAM33Q9BZ11 813 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 PRKD2Q9BZL6 878 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 DPEP3Q9H4B8 488 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 SYNCQ9H7C4 482 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 MRPL47Q9HD33 250 aaKnown RBP15.21■□□□□ 0.03
SHMT2-208ENST00000553868 FAM49BQ9NUQ9 324 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 CTTNBP2NLQ9P2B4 639 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 WDR35Q9P2L0 1181 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 CNOT8Q9UFF9 292 aaKnown RBP15.21■□□□□ 0.03
SHMT2-208ENST00000553868 DNAI1Q9UI46 699 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 LCMT1Q9UIC8 334 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 WASF3Q9UPY6 502 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 PAXBP1Q9Y5B6 917 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms