RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 A0A087X0B3 334 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 PNMA6EA0A0J9YXQ4 647 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 NCAM2O15394 837 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 TGM5O43548 720 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 NARSO43776 548 aaKnown RBP6.73□□□□□ -1.33
ATXN3-223ENST00000553686 H2AFYO75367 372 aaKnown RBP6.73□□□□□ -1.33
ATXN3-223ENST00000553686 PPM1AP35813 382 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 LIMK1P53667 647 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 SESN2P58004 480 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-223ENST00000553686 STARD6P59095 220 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 HGFACQ04756 655 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 LRRC32Q14392 662 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 SMC1AQ14683 1233 aaKnown RBP6.73□□□□□ -1.33
ATXN3-223ENST00000553686 PTPN14Q15678 1187 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 SOWAHCQ53LP3 525 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-223ENST00000553686 HS1BP3Q53T59 392 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 TSHZ1Q6ZSZ6 1077 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 FUKQ8N0W3 1084 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 C12orf76Q8N812 135 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-223ENST00000553686 COLGALT1Q8NBJ5 622 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 OR5AN1Q8NGI8 311 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 OR2W6PQ8NHA6 318 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 STAMQ92783 540 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 NELL1Q92832 810 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 GLG1Q92896 1179 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 EAF2Q96CJ1 260 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-223ENST00000553686 C16orf70Q9BSU1 422 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 OSBPL6Q9BZF3 934 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 RANBP17Q9H2T7 1088 aaKnown RBP6.73□□□□□ -1.33
ATXN3-223ENST00000553686 POFUT1Q9H488 388 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 ZMAT4Q9H898 229 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 MLXIPQ9HAP2 919 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 SPTLC3Q9NUV7 552 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 TYW1Q9NV66 732 aaKnown RBP6.73□□□□□ -1.33
ATXN3-223ENST00000553686 SETD4Q9NVD3 440 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 MYRFQ9Y2G1 1151 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 SQORQ9Y6N5 450 aa6.73□□□□□ -1.33
ATXN3-223ENST00000553686 KANSL1LA0AUZ9 987 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 TBKBP1A7MCY6 615 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 GSG1L2A8MUP6 293 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 GOLIM4O00461 696 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 TGFB3P10600 412 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 GLULP15104 373 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 CD40P25942 277 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 ATP2C1P98194 919 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-223ENST00000553686 GIT2Q14161 759 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 HSDL1Q3SXM5 330 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 FBXO47Q5MNV8 452 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 CELF3Q5SZQ8 465 aaKnown RBP6.72□□□□□ -1.33
ATXN3-223ENST00000553686 KANSL1Q7Z3B3 1105 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 GPR149Q86SP6 731 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 GFM2Q969S9 779 aaKnown RBP6.72□□□□□ -1.33
ATXN3-223ENST00000553686 CHMP4CQ96CF2 233 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 DYDC2Q96IM9 177 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 KLHL5Q96PQ7 755 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 OR14A2Q96R54 314 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 CDK5RAP1Q96SZ6 601 aaKnown RBP6.72□□□□□ -1.33
ATXN3-223ENST00000553686 NELL2Q99435 816 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 RXFP3Q9NSD7 469 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 NOB1Q9ULX3 412 aaKnown RBP6.72□□□□□ -1.33
ATXN3-223ENST00000553686 ASPMQ8IZT6 3477 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 ZBED9Q6R2W3 1325 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 NRCAMQ92823 1304 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 ZZEF1O43149 2961 aa6.72□□□□□ -1.33
ATXN3-223ENST00000553686 C1QTNF3-AMACRE9PGA6 284 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 MAFGO15525 162 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 KCNK5O95279 499 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 FKBP9O95302 570 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 CXCL14O95715 111 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 GGPS1O95749 300 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 SLC3A2P08195 630 aaKnown RBP6.71□□□□□ -1.34
ATXN3-223ENST00000553686 CD52P31358 61 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 CA8P35219 290 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 ADD2P35612 726 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 RPS19P39019 145 aaKnown RBP6.71□□□□□ -1.34
ATXN3-223ENST00000553686 SELENOPP49908 381 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 IL2P60568 153 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 TFAP4Q01664 338 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 OCRLQ01968 901 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 UBE3CQ15386 1083 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 CDSNQ15517 529 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 CCDC96Q2M329 555 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 LETM2Q2VYF4 491 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 AASDHQ4L235 1098 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-223ENST00000553686 ZBTB41Q5SVQ8 909 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 SYDE2Q5VT97 1194 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 ARHGEF16Q5VV41 709 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 ZSCAN25Q6NSZ9 544 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 BTNL9Q6UXG8 535 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 C15orf39Q6ZRI6 1047 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 FKBP9P1Q75LS8 142 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 GPR135Q8IZ08 494 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 RSAD2Q8WXG1 361 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 LPPQ93052 612 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 ZNF558Q96NG5 402 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 RMDN3Q96TC7 470 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 SFXN1Q9H9B4 322 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 SLC2A4RGQ9NR83 387 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 SPG21Q9NZD8 308 aa6.71□□□□□ -1.34
ATXN3-223ENST00000553686 ZNF215Q9UL58 517 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms