RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 ZDHHC7Q9NXF8 308 aa5.47□□□□□ -1.53
TMEM55B-204ENST00000553602 TAS2R1Q9NYW7 299 aa5.47□□□□□ -1.53
TMEM55B-204ENST00000553602 HEY2Q9UBP5 337 aa5.47□□□□□ -1.53
TMEM55B-204ENST00000553602 PPP1R1BQ9UD71 204 aaPredicted RBP5.47□□□□□ -1.53
TMEM55B-204ENST00000553602 RGS17Q9UGC6 210 aaPredicted RBP5.47□□□□□ -1.53
TMEM55B-204ENST00000553602 GTF2IRD1Q9UHL9 959 aa5.47□□□□□ -1.53
TMEM55B-204ENST00000553602 XPO7Q9UIA9 1087 aaKnown RBP5.47□□□□□ -1.53
TMEM55B-204ENST00000553602 SCOCQ9UIL1 159 aa5.47□□□□□ -1.53
TMEM55B-204ENST00000553602 CPSF3Q9UKF6 684 aaKnown RBP5.47□□□□□ -1.53
TMEM55B-204ENST00000553602 ZNF214Q9UL59 606 aaPredicted RBP5.47□□□□□ -1.53
TMEM55B-204ENST00000553602 ZMIZ1Q9ULJ6 1067 aa5.47□□□□□ -1.53
TMEM55B-204ENST00000553602 PLA2G4CQ9UP65 541 aa5.47□□□□□ -1.53
TMEM55B-204ENST00000553602 TTLL3Q9Y4R7 772 aa5.47□□□□□ -1.53
TMEM55B-204ENST00000553602 CTDP1Q9Y5B0 961 aaPredicted RBP5.47□□□□□ -1.53
TMEM55B-204ENST00000553602 EP400Q96L91 3159 aa5.47□□□□□ -1.53
TMEM55B-204ENST00000553602 DPPA5A6NC42 116 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 MAGEA13PA6NCF6 341 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ANKRD33BA6NCL7 494 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 LRRIQ4A6NIV6 560 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 FAM159BA6NKW6 160 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 C19orf81C9J6K1 198 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 KBTBD13C9JR72 458 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 COPEO14579 308 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 MSCO60682 206 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ENTPD5O75356 428 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 MAFO75444 373 aaPredicted RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 KRT38O76015 456 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 RNF8O76064 485 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 STK10O94804 968 aaKnown RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 CALCAP01258 141 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 IFNB1P01574 187 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 SERPINA6P08185 405 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 HOXC6P09630 235 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 SETSIPP0DME0 302 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 RBP3P10745 1247 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ESRRAP11474 423 aaPredicted RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 KRT3P12035 628 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 MLNP12872 115 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ALOX15P16050 662 aaPredicted RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 EDNRBP24530 442 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 RPS12P25398 132 aaKnown RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 BRD2P25440 801 aaKnown RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 IL1R2P27930 398 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 CRABP2P29373 138 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 SERPINB3P29508 390 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 SSTR1P30872 391 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ATICP31939 592 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ACOT2P49753 483 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ZNF143P52747 638 aaPredicted RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 GDF10P55107 478 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ZNF280AP59817 542 aaPredicted RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 MYL6P60660 151 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ACTR3P61158 418 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 YWHAZP63104 245 aaKnown RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 MXRA7P84157 204 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 PLCB3Q01970 1234 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ZBTB16Q05516 673 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 BTKQ06187 659 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 POU5F1BQ06416 359 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 INCA1Q0VD86 236 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 SF3A3Q12874 501 aaKnown RBP eCLIP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 CAPSQ13938 189 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 BAATQ14032 418 aaPredicted RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 DPYSL3Q14195 570 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 MXD4Q14582 209 aaPredicted RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 EFTUD2Q15029 972 aaKnown RBP eCLIP5.46□□□□□ -1.542e-10■■■■■ 32.9
TMEM55B-204ENST00000553602 AGERQ15109 404 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 RBBP5Q15291 538 aaKnown RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 LLGL1Q15334 1064 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 STILQ15468 1287 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 CCDC6Q16204 474 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 KYAT1Q16773 422 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ZNF699Q32M78 642 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 BBS9Q3SYG4 887 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 KBTBD12Q3ZCT8 623 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 MTERF2Q49AM1 385 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 PTPN20Q4JDL3 420 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ATP13A4Q4VNC1 1196 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 KHDC1Q4VXA5 237 aaKnown RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 C2CD6Q53TS8 623 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ACSBG2Q5FVE4 666 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 TJAP1Q5JTD0 557 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ZFYVE27Q5T4F4 411 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 C6orf163Q5TEZ5 329 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 TMEM164Q5U3C3 297 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 IER5Q5VY09 327 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 FAM160B1Q5W0V3 765 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 DCAF15Q66K64 600 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 KAZNQ674X7 775 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 STEAP4Q687X5 459 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 SLC9A4Q6AI14 798 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 TXNRD3NBQ6F5E7 133 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 PTCRAQ6ISU1 281 aaPredicted RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 SLC30A9Q6PML9 568 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 POTEAQ6S8J7 498 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 DSTYKQ6XUX3 929 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 TSHZ1Q6ZSZ6 1077 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 NCAPG2Q86XI2 1143 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 TRIM50Q86XT4 487 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 XYLT1Q86Y38 959 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms