RNA–Protein interactions for RNA: ENST00000553460.5

TMEM55B-203, humanhuman

TSL 5

Gene TMEM55B, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-203ENST00000553460 TULP3O75386 442 aa17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 CHRM1P11229 460 aaPredicted RBP17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 ATP5C1P36542 298 aaKnown RBP17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 PPP3CAQ08209 521 aa17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 RNF43Q68DV7 783 aa17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 TCEAL6Q6IPX3 200 aa17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 TMEM92Q6UXU6 159 aa17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 CYP2U1Q7Z449 544 aa17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 OLIG1Q8TAK6 271 aa17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 KCNV2Q8TDN2 545 aa17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 TCEAL3Q969E4 200 aa17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 CYFIP2Q96F07 1278 aa17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 CHAMP1Q96JM3 812 aa17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 TWNKQ96RR1 684 aa17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 MMRN2Q9H8L6 949 aa17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 APOBEC3GQ9HC16 384 aaKnown RBP17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 TMEM8AQ9HCN3 771 aa17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 ACACBO00763 2458 aa17.11■□□□□ 0.33
TMEM55B-203ENST00000553460 TPRP12270 2363 aaKnown RBP17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 LAMA1P25391 3075 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 THADAQ6YHU6 1953 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 NUP205Q92621 2012 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 CYP26A1O43174 497 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 CILPO75339 1184 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 CD58P19256 250 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 ACO1P21399 889 aaKnown RBP17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 BCKDHBP21953 392 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 GTF2H1P32780 548 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 ADAM9Q13443 819 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 BYSLQ13895 437 aaKnown RBP17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 C10orf76Q5T2E6 689 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 EMC10Q5UCC4 262 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 HTR3DQ70Z44 454 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 GPRIN1Q7Z2K8 1008 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 TADA2BQ86TJ2 420 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 TMEM25Q86YD3 366 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 TTC39CQ8N584 583 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 NAT16Q8N8M0 369 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 TERB1Q8NA31 727 aa17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 KLF16Q9BXK1 252 aaPredicted RBP17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 CIZ1Q9ULV3 898 aaPredicted RBP17.1■□□□□ 0.33
TMEM55B-203ENST00000553460 CNOT1A5YKK6 2376 aaKnown RBP17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 TCRBV21S2A2A0A5A6 115 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 HHLA1C9JL84 531 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 TM4SF5O14894 197 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 STX10O60499 249 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 TBX18O95935 607 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 HNRNPLP14866 589 aaKnown RBP eCLIP17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 P2RY2P41231 377 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 DHPSP49366 369 aaPredicted RBP17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 PGFP49763 221 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 PSEN1P49768 467 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 EDRF1Q3B7T1 1238 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 ZCWPW2Q504Y3 356 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 KRT39Q6A163 491 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 GRAMD4Q6IC98 578 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 KLHDC10Q6PID8 442 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 LPCAT2Q7L5N7 544 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 ZNF513Q8N8E2 541 aaPredicted RBP17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 HMGB4Q8WW32 186 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 WBP2Q969T9 261 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 FAXDC2Q96IV6 333 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 XPO6Q96QU8 1125 aaKnown RBP17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 GOLPH3LQ9H4A5 285 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 DNAJC17Q9NVM6 304 aaKnown RBP17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 EPG5Q9HCE0 2579 aa17.09■□□□□ 0.33
TMEM55B-203ENST00000553460 PLXND1Q9Y4D7 1925 aa17.08■□□□□ 0.33
TMEM55B-203ENST00000553460 A0A1W2PQH9 124 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 NEDD8-MDP1E9PL57 170 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 KHNYNO15037 678 aaKnown RBP17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 MAP3K13O43283 966 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 ADAM23O75077 832 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 ZNF202O95125 648 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 EPB41P11171 864 aaKnown RBP17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 RARGP13631 454 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 MXI1P50539 228 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 PGBD3Q8N328 593 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 CDK5RAP1Q96SZ6 601 aaKnown RBP17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 LSM14BQ9BX40 385 aaKnown RBP17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 BBS2Q9BXC9 721 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 NMUR1Q9HB89 426 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 ZDHHC4Q9NPG8 344 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 RMND1Q9NWS8 449 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 OSER1Q9NX31 292 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 MARK1Q9P0L2 795 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 WDR35Q9P2L0 1181 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 DNMT3LQ9UJW3 386 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 NAGPAQ9UK23 515 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 ABCA7Q8IZY2 2146 aa17.08■□□□□ 0.32
TMEM55B-203ENST00000553460 LNP1A1A4G5 178 aa17.07■□□□□ 0.32
TMEM55B-203ENST00000553460 CETN3O15182 167 aa17.07■□□□□ 0.32
TMEM55B-203ENST00000553460 CACNG3O60359 315 aa17.07■□□□□ 0.32
TMEM55B-203ENST00000553460 GREM1O60565 184 aa17.07■□□□□ 0.32
TMEM55B-203ENST00000553460 RALAP11233 206 aa17.07■□□□□ 0.32
TMEM55B-203ENST00000553460 HOXB2P14652 356 aa17.07■□□□□ 0.32
TMEM55B-203ENST00000553460 TYRP14679 529 aa17.07■□□□□ 0.32
TMEM55B-203ENST00000553460 DPP6P42658 865 aa17.07■□□□□ 0.32
TMEM55B-203ENST00000553460 PLA2G4AP47712 749 aa17.07■□□□□ 0.32
TMEM55B-203ENST00000553460 KIF11P52732 1056 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms