RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 MEI4A8MW99 385 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 NEDD8-MDP1E9PL57 170 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 H3BQV1 296 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 GFRA2O00451 464 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 KIAA0391O15091 583 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 ATXN1LP0C7T5 689 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 ZNF883P0CG24 379 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 IRF1P10914 325 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 SLC5A3P53794 718 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 BNC1Q01954 994 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 ALCAMQ13740 583 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 METTL3Q86U44 580 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 MARCH9Q86YJ5 346 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 CBWD2Q8IUF1 395 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 ZCCHC9Q8N567 271 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 SCAMP5Q8TAC9 235 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 SETD7Q8WTS6 366 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 SCFD1Q8WVM8 642 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 TOE1Q96GM8 510 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 EPSTI1Q96J88 318 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 WSB2Q9NYS7 404 aaPredicted RBP12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 IL37Q9NZH6 218 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 MARK1Q9P0L2 795 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 GMIPQ9P107 970 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 USP36Q9P275 1121 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 ADAMTS20P59510 1910 aa12.4□□□□□ -0.42
HNRNPC-206ENST00000553444 PI4KAP42356 2102 aa12.4□□□□□ -0.43
HNRNPC-206ENST00000553444 FAM92AA1XBS5 289 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 FRMD3A2A2Y4 597 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 ZNF233A6NK53 670 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 CILPO75339 1184 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 PRPF6O94906 941 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 CER1O95813 267 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 CST3P01034 146 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 CISD3P0C7P0 127 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 NCAM1P13591 858 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 TYRP14679 529 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 CYP4F3Q08477 520 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 CAMK2BQ13554 666 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 SURF1Q15526 300 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 DBX2Q6ZNG2 339 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 HTR3DQ70Z44 454 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 TRAPPC11Q7Z392 1133 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 WDR49Q8IV35 697 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 SCUBE3Q8IX30 993 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 B3GALNT2Q8NCR0 500 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 CADM4Q8NFZ8 388 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 CRELD1Q96HD1 420 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 XPO6Q96QU8 1125 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 KCNK16Q96T55 309 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 BBS2Q9BXC9 721 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 MIR1-1HGQ9H1L0 117 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 GAREM1Q9H706 876 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 TM7SF3Q9NS93 570 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 WDR35Q9P2L0 1181 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 PCDHGB2Q9Y5G2 931 aa12.39□□□□□ -0.43
HNRNPC-206ENST00000553444 ANK1P16157 1881 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 TRABD2BA6NFA1 517 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 A8MXQ7 604 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 WASH3PC4AMC7 463 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 FLRT2O43155 660 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 IDEP14735 1019 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 GJB2P29033 226 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 MATKP42679 507 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 PGFP49763 221 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 TNNC1P63316 161 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 SF3A1Q15459 793 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 HLA-BQ31612 363 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 FUT11Q495W5 492 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 DCAF12L1Q5VU92 463 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 IL27RAQ6UWB1 636 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 TPGS1Q6ZTW0 290 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 SV2BQ7L1I2 683 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 FAM35AQ86V20 835 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 CDC6Q99741 560 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 GPR174Q9BXC1 333 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 KLF16Q9BXK1 252 aaPredicted RBP12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 NACA2Q9H009 215 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 PRDM16Q9HAZ2 1276 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 ITM2CQ9NQX7 267 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 CCDC39Q9UFE4 941 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 STON1Q9Y6Q2 735 aa12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 ZNF638Q14966 1978 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-206ENST00000553444 PLXND1Q9Y4D7 1925 aa12.37□□□□□ -0.43
HNRNPC-206ENST00000553444 METTL12A8MUP2 240 aa12.37□□□□□ -0.43
HNRNPC-206ENST00000553444 BCAT2O15382 392 aaPredicted RBP12.37□□□□□ -0.43
HNRNPC-206ENST00000553444 TLR5O60602 858 aa12.37□□□□□ -0.43
HNRNPC-206ENST00000553444 STAU1O95793 577 aaKnown RBP12.37□□□□□ -0.43
HNRNPC-206ENST00000553444 TBX18O95935 607 aa12.37□□□□□ -0.43
HNRNPC-206ENST00000553444 DGKGP49619 791 aa12.37□□□□□ -0.43
HNRNPC-206ENST00000553444 C19orf57Q0VDD7 668 aa12.37□□□□□ -0.43
HNRNPC-206ENST00000553444 WDR72Q3MJ13 1102 aa12.37□□□□□ -0.43
HNRNPC-206ENST00000553444 RRAGBQ5VZM2 374 aa12.37□□□□□ -0.43
HNRNPC-206ENST00000553444 ERICH6BQ5W0A0 696 aa12.37□□□□□ -0.43
HNRNPC-206ENST00000553444 PAQR9Q6ZVX9 377 aa12.37□□□□□ -0.43
HNRNPC-206ENST00000553444 GALNT15Q8N3T1 639 aa12.37□□□□□ -0.43
HNRNPC-206ENST00000553444 C1orf216Q8TAB5 229 aa12.37□□□□□ -0.43
HNRNPC-206ENST00000553444 P2RY11Q96G91 374 aa12.37□□□□□ -0.43
HNRNPC-206ENST00000553444 UBL7Q96S82 380 aaPredicted RBP12.37□□□□□ -0.43
HNRNPC-206ENST00000553444 MKRN2Q9H000 416 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms