RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 ANKRD20A12PQ8NF67 263 aa16.11■□□□□ 0.17
SHMT2-204ENST00000553324 CD101Q93033 1021 aa16.11■□□□□ 0.17
SHMT2-204ENST00000553324 NAT10Q9H0A0 1025 aaKnown RBP16.11■□□□□ 0.17
SHMT2-204ENST00000553324 OLA1Q9NTK5 396 aaKnown RBP16.11■□□□□ 0.17
SHMT2-204ENST00000553324 STRIP2Q9ULQ0 834 aa16.11■□□□□ 0.17
SHMT2-204ENST00000553324 ZNF510Q9Y2H8 683 aa16.11■□□□□ 0.17
SHMT2-204ENST00000553324 M0QYV0 167 aa16.1■□□□□ 0.17
SHMT2-204ENST00000553324 BRD2P25440 801 aaKnown RBP16.1■□□□□ 0.17
SHMT2-204ENST00000553324 EIF2DP41214 584 aaKnown RBP16.1■□□□□ 0.17
SHMT2-204ENST00000553324 ACADSBP45954 432 aa16.1■□□□□ 0.17
SHMT2-204ENST00000553324 CXCL12P48061 93 aa16.1■□□□□ 0.17
SHMT2-204ENST00000553324 CSTF1Q05048 431 aaKnown RBP16.1■□□□□ 0.17
SHMT2-204ENST00000553324 ARHGAP44Q17R89 818 aa16.1■□□□□ 0.17
SHMT2-204ENST00000553324 MIIPQ5JXC2 388 aa16.1■□□□□ 0.17
SHMT2-204ENST00000553324 BTBD8Q5XKL5 378 aa16.1■□□□□ 0.17
SHMT2-204ENST00000553324 RSRC2Q7L4I2 434 aaKnown RBP16.1■□□□□ 0.17
SHMT2-204ENST00000553324 MAML2Q8IZL2 1156 aaPredicted RBP16.1■□□□□ 0.17
SHMT2-204ENST00000553324 ZNF606Q8WXB4 792 aa16.1■□□□□ 0.17
SHMT2-204ENST00000553324 IRGQQ8WZA9 623 aa16.1■□□□□ 0.17
SHMT2-204ENST00000553324 ULBP1Q9BZM6 244 aa16.1■□□□□ 0.17
SHMT2-204ENST00000553324 ABCC13Q9NSE7 274 aa16.1■□□□□ 0.17
SHMT2-204ENST00000553324 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.09■□□□□ 0.17
SHMT2-204ENST00000553324 TULP2O00295 520 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 FBXO21O94952 628 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 LETM1O95202 739 aaPredicted RBP16.09■□□□□ 0.17
SHMT2-204ENST00000553324 PTMSP20962 102 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 GNA15P30679 374 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 USP8P40818 1118 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 BPIFB4P59827 614 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 GAD2Q05329 585 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 PTK2Q05397 1052 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 ADIGQ0VDE8 80 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 HSP90AA4PQ58FG1 418 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 PMF1Q6P1K2 205 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 RHBDF2Q6PJF5 856 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 NUDT18Q6ZVK8 323 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 STK32AQ8WU08 396 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 RNF139Q8WU17 664 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 SHC3Q92529 594 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 GOLGA1Q92805 767 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 SECISBP2LQ93073 1101 aaKnown RBP16.09■□□□□ 0.17
SHMT2-204ENST00000553324 DCLK3Q9C098 648 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 PRMT8Q9NR22 394 aaPredicted RBP16.09■□□□□ 0.17
SHMT2-204ENST00000553324 FAM86C1Q9NVL1 165 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 DNAJC12Q9UKB3 198 aa16.09■□□□□ 0.17
SHMT2-204ENST00000553324 CACNA1HO95180 2353 aa16.08■□□□□ 0.17
SHMT2-204ENST00000553324 ANAPC1Q9H1A4 1944 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 ZNF638Q14966 1978 aaKnown RBP16.08■□□□□ 0.16
SHMT2-204ENST00000553324 SART1O43290 800 aaKnown RBP16.08■□□□□ 0.16
SHMT2-204ENST00000553324 THAP12O43422 761 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 CYP17A1P05093 508 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 IRF1P10914 325 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 ADH5P11766 374 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 LCP1P13796 627 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 GPD2P43304 727 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 MYL5Q02045 173 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 CDKAL1Q5VV42 579 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 BSPRYQ5W0U4 402 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 FSTL4Q6MZW2 842 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 GJB7Q6PEY0 223 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 ATRIPQ8WXE1 791 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 CHFRQ96EP1 664 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 ZSWIM1Q9BR11 485 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 SPHK2Q9NRA0 654 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 RBM12Q9NTZ6 932 aaKnown RBP16.08■□□□□ 0.16
SHMT2-204ENST00000553324 FANCLQ9NW38 375 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 ZSCAN32Q9NX65 697 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 MARCH2Q9P0N8 246 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 WDR35Q9P2L0 1181 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 NUDT5Q9UKK9 219 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 PCDHGA2Q9Y5H1 932 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 OBSL1O75147 1896 aa16.08■□□□□ 0.16
SHMT2-204ENST00000553324 TICRRQ7Z2Z1 1910 aa16.07■□□□□ 0.16
SHMT2-204ENST00000553324 PAPSS2O95340 614 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-204ENST00000553324 CDK11BP21127 795 aaKnown RBP16.07■□□□□ 0.16
SHMT2-204ENST00000553324 HOXD11P31277 338 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-204ENST00000553324 CHKAP35790 457 aa16.07■□□□□ 0.16
SHMT2-204ENST00000553324 RPL34P49207 117 aaKnown RBP16.07■□□□□ 0.16
SHMT2-204ENST00000553324 MRE11P49959 708 aa16.07■□□□□ 0.16
SHMT2-204ENST00000553324 SNX16P57768 344 aa16.07■□□□□ 0.16
SHMT2-204ENST00000553324 DAOAP59103 153 aa16.07■□□□□ 0.16
SHMT2-204ENST00000553324 EFEMP1Q12805 493 aa16.07■□□□□ 0.16
SHMT2-204ENST00000553324 GAS6Q14393 721 aa16.07■□□□□ 0.16
SHMT2-204ENST00000553324 LY6G5CQ5SRR4 150 aa16.07■□□□□ 0.16
SHMT2-204ENST00000553324 FKBP15Q5T1M5 1219 aa16.07■□□□□ 0.16
SHMT2-204ENST00000553324 MIB1Q86YT6 1006 aa16.07■□□□□ 0.16
SHMT2-204ENST00000553324 BBS7Q8IWZ6 715 aa16.07■□□□□ 0.16
SHMT2-204ENST00000553324 NKD2Q969F2 451 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-204ENST00000553324 PNKPQ96T60 521 aa16.07■□□□□ 0.16
SHMT2-204ENST00000553324 TRIM62Q9BVG3 475 aa16.07■□□□□ 0.16
SHMT2-204ENST00000553324 FBRSL1Q9HCM7 1045 aaKnown RBP16.07■□□□□ 0.16
SHMT2-204ENST00000553324 RASAL2Q9UJF2 1139 aa16.07■□□□□ 0.16
SHMT2-204ENST00000553324 A0A0A0MRY4 1105 aa16.06■□□□□ 0.16
SHMT2-204ENST00000553324 LRRC10BA6NIK2 292 aa16.06■□□□□ 0.16
SHMT2-204ENST00000553324 YJEFN3A6XGL0 299 aa16.06■□□□□ 0.16
SHMT2-204ENST00000553324 BECN2A8MW95 431 aa16.06■□□□□ 0.16
SHMT2-204ENST00000553324 CHURC1-FNTBB4DL54 471 aa16.06■□□□□ 0.16
SHMT2-204ENST00000553324 E7ENQ6 273 aa16.06■□□□□ 0.16
SHMT2-204ENST00000553324 FOXN3O00409 490 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-204ENST00000553324 HOXC11O43248 304 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms