RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 ENPP2Q13822 863 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 SV2CQ496J9 727 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 C6orf132Q5T0Z8 1188 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 HAUS3Q68CZ6 603 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 SLC39A4Q6P5W5 647 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 INO80CQ6PI98 192 aaPredicted RBP12.54□□□□□ -0.4
SNRPF-205ENST00000553192 KCNK18Q7Z418 384 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 DDX42Q86XP3 938 aaKnown RBP eCLIP12.54□□□□□ -0.4
SNRPF-205ENST00000553192 SNX19Q92543 992 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 ZNF578Q96N58 590 aaPredicted RBP12.54□□□□□ -0.4
SNRPF-205ENST00000553192 DUSP9Q99956 384 aaKnown RBP12.54□□□□□ -0.4
SNRPF-205ENST00000553192 NUP58Q9BVL2 599 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 PCED1AQ9H1Q7 454 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 HSPBP1Q9NZL4 362 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 C2CD2Q9Y426 696 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 PCDHB1Q9Y5F3 818 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 RELNP78509 3460 aa12.54□□□□□ -0.4
SNRPF-205ENST00000553192 CREBBPQ92793 2442 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 GABRDO14764 452 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 SUV39H1O43463 412 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 ABL1P00519 1130 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 PIGRP01833 764 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 OR52Z1P0C646 297 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 MYF5P13349 255 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 CR2P20023 1033 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 ACSL1P33121 698 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 PPP3CCP48454 512 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 COPAP53621 1224 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 TAF10Q12962 218 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 C4orf17Q53FE4 359 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 ATG14Q6ZNE5 492 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 RUFY3Q7L099 469 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 FAM124AQ86V42 546 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 SAP25Q8TEE9 199 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 SCFD1Q8WVM8 642 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 KCNE4Q8WWG9 221 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 KCNN1Q92952 543 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 BIRC7Q96CA5 298 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 SIPA1Q96FS4 1042 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 BICD1Q96G01 975 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 P2RY11Q96G91 374 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 ASB7Q9H672 318 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 BSNQ9UPA5 3926 aa12.53□□□□□ -0.4
SNRPF-205ENST00000553192 NEDD8-MDP1E9PL57 170 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 COCHO43405 550 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 GREM1O60565 184 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 DXOO77932 396 aaKnown RBP12.52□□□□□ -0.41
SNRPF-205ENST00000553192 AFPP02771 609 aaKnown RBP12.52□□□□□ -0.41
SNRPF-205ENST00000553192 MPOP05164 745 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 BDNFP23560 247 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 GUCY2CP25092 1073 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 ACOT2P49753 483 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 LIG4P49917 911 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 MYL7Q01449 175 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 RAD51AP2Q09MP3 1159 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 ORC1Q13415 861 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 STARD3Q14849 445 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 LINC00303Q3SY05 128 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 VSTM1Q6UX27 236 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 KDM7AQ6ZMT4 941 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 CACUL1Q86Y37 369 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 DIS3L2Q8IYB7 885 aaKnown RBP12.52□□□□□ -0.41
SNRPF-205ENST00000553192 EID2Q8N6I1 236 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 PRCCQ92733 491 aaPredicted RBP12.52□□□□□ -0.41
SNRPF-205ENST00000553192 MYLPFQ96A32 169 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 CEP295NLQ96MC4 621 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 ELF4Q99607 663 aaPredicted RBP12.52□□□□□ -0.41
SNRPF-205ENST00000553192 MSTO1Q9BUK6 570 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 ZSWIM6Q9HCJ5 1215 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 CRTAC1Q9NQ79 661 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 STARD5Q9NSY2 213 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 ORC3Q9UBD5 711 aaPredicted RBP12.52□□□□□ -0.41
SNRPF-205ENST00000553192 ABCA12Q86UK0 2595 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 NUMA1Q14980 2115 aa12.52□□□□□ -0.41
SNRPF-205ENST00000553192 CLEC18AA5D8T8 446 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 LAD1O00515 517 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 DFNA5O60443 496 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 CDKL5O76039 1030 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 ITGAVP06756 1048 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 TYRP14679 529 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 ITGB6P18564 788 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 ACO1P21399 889 aaKnown RBP12.51□□□□□ -0.41
SNRPF-205ENST00000553192 PSMA5P28066 241 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 CCR10P46092 362 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 SMTNP53814 917 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 NCKAP1LP55160 1127 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 NOP14P78316 857 aaKnown RBP12.51□□□□□ -0.41
SNRPF-205ENST00000553192 ILKQ13418 452 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 SERINC3Q13530 473 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 CLEC18BQ6UXF7 455 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 CLEC18CQ8NCF0 446 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 CXorf38Q8TB03 319 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 BBS2Q9BXC9 721 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 DPH1Q9BZG8 443 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 ASCL3Q9NQ33 180 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 TMEM30AQ9NV96 361 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 THAP10Q9P2Z0 257 aaPredicted RBP12.51□□□□□ -0.41
SNRPF-205ENST00000553192 DNM3Q9UQ16 869 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 SH3BP1Q9Y3L3 701 aa12.51□□□□□ -0.41
SNRPF-205ENST00000553192 DOPEY1Q5JWR5 2465 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms