RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 TUBB4AP04350 444 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 EPCAMP16422 314 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 TFE3P19532 575 aaPredicted RBP9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 CXCR5P32302 372 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 NRIP1P48552 1158 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 PGFP49763 221 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 ZNF143P52747 638 aaPredicted RBP9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 SMAD3P84022 425 aaKnown RBP9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 NME3Q13232 169 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 RPS6KA1Q15418 735 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 CCDC14Q49A88 953 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 RAB6CQ53S08 254 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 PPM1LQ5SGD2 360 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 ZNF697Q5TEC3 545 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 MEI1Q5TIA1 1274 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 SYPL2Q5VXT5 272 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 PM20D1Q6GTS8 502 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 PDE12Q6L8Q7 609 aaKnown RBP9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 NT5DC3Q86UY8 548 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 ZNF512Q96ME7 567 aaPredicted RBP9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 SLITRK1Q96PX8 696 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 RAB6CQ9H0N0 254 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 ZWILCHQ9H900 591 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 MAN1C1Q9NR34 630 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 PCSK1NQ9UHG2 260 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 COLQQ9Y215 455 aaPredicted RBP9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 ATG2AQ2TAZ0 1938 aa9.13□□□□□ -0.95
AC055716.2-201ENST00000552545 FANCGO15287 622 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 SRGAP2O75044 1071 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 DAB1O75553 588 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 CSH1P0DML2 217 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 CSH2P0DML3 217 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 MATKP42679 507 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 LILRA6Q6PI73 481 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 DNAJB7Q7Z6W7 309 aaPredicted RBP9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 SLFN11Q7Z7L1 901 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 MON1AQ86VX9 555 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 ELMOD1Q8N336 334 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 RNF139Q8WU17 664 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 FAM172AQ8WUF8 416 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 IRGQQ8WZA9 623 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 TBCBQ99426 244 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 CNPY3Q9BT09 278 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 ZNF576Q9H609 170 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 NMUR1Q9HB89 426 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 HSFX1Q9UBD0 423 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 FBXW11Q9UKB1 542 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 STAP1Q9ULZ2 295 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 SCML2Q9UQR0 700 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 DOCK6Q96HP0 2047 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 M0QYT0 321 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 TCF4P15884 667 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 NOS2P35228 1153 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 SCNN1AP37088 669 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 SLC1A1P43005 524 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 PITX1P78337 314 aaPredicted RBP9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 ODF2Q5BJF6 829 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 SCD5Q86SK9 330 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 ITIH5Q86UX2 942 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 UBL4BQ8N7F7 174 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 SLC22A17Q8WUG5 538 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 RNF34Q969K3 372 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 ACSF2Q96CM8 615 aaPredicted RBP9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 CAPZA3Q96KX2 299 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 FAM204AQ9H8W3 233 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 TLR8Q9NR97 1041 aaKnown RBP9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 ABCC13Q9NSE7 274 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 KLHL11Q9NVR0 708 aa9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 COL4A4P53420 1690 aaPredicted RBP9.12□□□□□ -0.95
AC055716.2-201ENST00000552545 KCNK3O14649 394 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 RFPL2O75678 378 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 FYNP06241 537 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 GLI1P08151 1106 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 GTF2F1P35269 517 aaKnown RBP eCLIP9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 ATXN1P54253 815 aaKnown RBP9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 TAS2R40P59535 323 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 LLGL1Q15334 1064 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 HADHQ16836 314 aaKnown RBP9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 SMTNL2Q2TAL5 461 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 BHLHA9Q7RTU4 235 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 ARHGAP18Q8N392 663 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 FNIP1Q8TF40 1166 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 KRT35Q92764 455 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 DDX23Q9BUQ8 820 aaKnown RBP9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 TLR10Q9BXR5 811 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 NACA2Q9H009 215 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 GEMIN8Q9NWZ8 242 aaKnown RBP9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 OSER1Q9NX31 292 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 EHD2Q9NZN4 543 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 SFMBT1Q9UHJ3 866 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 LCMT1Q9UIC8 334 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 MAFFQ9ULX9 164 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 TRIOBPQ9H2D6 2365 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 LRCH4O75427 683 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 RALAP11233 206 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 RARGP13631 454 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 MIPP30301 263 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 MARCKSL1P49006 195 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 DEUP1Q05D60 604 aa9.11□□□□□ -0.95
AC055716.2-201ENST00000552545 EFEMP1Q12805 493 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms