RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	ZNF487	B1APH4	448 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	CAPN9	O14815	690 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	ECEL1	O95672	775 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	FYN	P06241	537 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	MYBL2	P10244	700 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	CPB1	P15086	417 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	LAG3	P18627	525 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	EN2	P19622	333 aa	Predicted RBP	13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	RDX	P35241	583 aa	Known RBP	13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	SLC5A3	P53794	718 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	EPHB4	P54760	987 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	ADCY2	Q08462	1091 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	GPR17	Q13304	367 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	CUL1	Q13616	776 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	DPYSL3	Q14195	570 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	BTG3	Q14201	252 aa	Predicted RBP	13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	KRT81	Q14533	505 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	SPOUT1	Q5T280	376 aa	Known RBP	13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	ERMARD	Q5T6L9	678 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	KCNT2	Q6UVM3	1135 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	BBS12	Q6ZW61	710 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	BEND5	Q7L4P6	421 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	TAS1R1	Q7RTX1	841 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	PSTK	Q8IV42	348 aa	Known RBP	13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	SCN4B	Q8IWT1	228 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	CCDC105	Q8IYK2	499 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	SLC39A11	Q8N1S5	342 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	FAM71B	Q8TC56	605 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	SPPL2B	Q8TCT7	592 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	AEN	Q8WTP8	325 aa	Known RBP	13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	TRIM51	Q9BSJ1	452 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	FAM114A2	Q9NRY5	505 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	ZNF446	Q9NWS9	450 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	MTRR	Q9UBK8	725 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	PRKAG2	Q9UGJ0	569 aa		13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.24	□□□□□ -0.29
CACNB3-223	ENST00000552480	PCNT	O95613	3336 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	DNAH12	Q6ZR08	3092 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	ESYT3	A0FGR9	886 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	MTMR11	A4FU01	709 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	ATP8B1	O43520	1251 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	CD48	P09326	243 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	CARS	P49589	748 aa	Known RBP	13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	ATXN1	P54253	815 aa	Known RBP	13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	ARPP19	P56211	112 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	FPGS	Q05932	587 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	DEUP1	Q05D60	604 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	SNX1	Q13596	522 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	SYPL2	Q5VXT5	272 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	DUPD1	Q68J44	220 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	FAM117B	Q6P1L5	589 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	RFX6	Q8HWS3	928 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	GSPT2	Q8IYD1	628 aa	Known RBP	13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	COLGALT1	Q8NBJ5	622 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	TTC13	Q8NBP0	860 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	ATL2	Q8NHH9	583 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	ATG4A	Q8WYN0	398 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	PIK3R5	Q8WYR1	880 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	PGAP3	Q96FM1	320 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	HINFP	Q9BQA5	517 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	ERP44	Q9BS26	406 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	ZNF670	Q9BS34	389 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	HERC2P3	Q9BVR0	1158 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	VN1R3	Q9BXE9	311 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	CALN1	Q9BXU9	219 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	PCDH18	Q9HCL0	1135 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	GPATCH2L	Q9NWQ4	482 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	CALCOCO1	Q9P1Z2	691 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	AP4E1	Q9UPM8	1137 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	NAALADL1	Q9UQQ1	740 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	BACE2	Q9Y5Z0	518 aa		13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	MRPL42	Q9Y6G3	142 aa	Known RBP	13.23	□□□□□ -0.29
CACNB3-223	ENST00000552480	PTPRS	Q13332	1948 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	ALPK3	Q96L96	1907 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480		M0QYT0	321 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	LIAS	O43766	372 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	CST8	O60676	142 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	FGB	P02675	491 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	SOD2	P04179	222 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	NCAM1	P13591	858 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	GBP1	P32455	592 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	KCNJ1	P48048	391 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	AIF1	P55008	147 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	DRG2	P55039	364 aa	Known RBP	13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	PITX1	P78337	314 aa	Predicted RBP	13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	LMNB2	Q03252	620 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	NNT	Q13423	1086 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	TFDP2	Q14188	446 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	PSMD5	Q16401	504 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	DPYSL2	Q16555	572 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	CA9	Q16790	459 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	BSPRY	Q5W0U4	402 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	SLC8B1	Q6J4K2	584 aa		13.22	□□□□□ -0.29
CACNB3-223	ENST00000552480	EMB	Q6PCB8	327 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms