RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 HCN2Q9UL51 889 aa17.04■□□□□ 0.32
CALCOCO1-220ENST00000552282 PCDHA5Q9Y5H7 936 aa17.04■□□□□ 0.32
CALCOCO1-220ENST00000552282 BEST1O76090 585 aa17.03■□□□□ 0.32
CALCOCO1-220ENST00000552282 CMA1P23946 247 aa17.03■□□□□ 0.32
CALCOCO1-220ENST00000552282 NDST1P52848 882 aa17.03■□□□□ 0.32
CALCOCO1-220ENST00000552282 KDSRQ06136 332 aa17.03■□□□□ 0.32
CALCOCO1-220ENST00000552282 IFRD2Q12894 506 aaPredicted RBP17.03■□□□□ 0.32
CALCOCO1-220ENST00000552282 EMC10Q5UCC4 262 aa17.03■□□□□ 0.32
CALCOCO1-220ENST00000552282 SLC23A3Q6PIS1 610 aa17.03■□□□□ 0.32
CALCOCO1-220ENST00000552282 CLEC20AQ6ZU45 233 aa17.03■□□□□ 0.32
CALCOCO1-220ENST00000552282 GRAMD1CQ8IYS0 662 aa17.03■□□□□ 0.32
CALCOCO1-220ENST00000552282 ZNF513Q8N8E2 541 aaPredicted RBP17.03■□□□□ 0.32
CALCOCO1-220ENST00000552282 WBP2Q969T9 261 aa17.03■□□□□ 0.32
CALCOCO1-220ENST00000552282 FAM124BQ9H5Z6 455 aaPredicted RBP17.03■□□□□ 0.32
CALCOCO1-220ENST00000552282 CEP192Q8TEP8 1941 aa17.03■□□□□ 0.32
CALCOCO1-220ENST00000552282 SPEGQ15772 3267 aa17.03■□□□□ 0.32
CALCOCO1-220ENST00000552282 CACNA1EQ15878 2313 aa17.03■□□□□ 0.32
CALCOCO1-220ENST00000552282 IGF2RP11717 2491 aa17.02■□□□□ 0.32
CALCOCO1-220ENST00000552282 A0A1W2PQF6 199 aa17.02■□□□□ 0.32
CALCOCO1-220ENST00000552282 SCAMP3O14828 347 aaKnown RBP17.02■□□□□ 0.32
CALCOCO1-220ENST00000552282 RHOBTB3O94955 611 aa17.02■□□□□ 0.32
CALCOCO1-220ENST00000552282 KIF20AO95235 890 aa17.02■□□□□ 0.32
CALCOCO1-220ENST00000552282 FAM200BP0CF97 657 aa17.02■□□□□ 0.32
CALCOCO1-220ENST00000552282 CCDC130P13994 396 aa17.02■□□□□ 0.32
CALCOCO1-220ENST00000552282 TRIM21P19474 475 aaKnown RBP17.02■□□□□ 0.32
CALCOCO1-220ENST00000552282 PGFP49763 221 aa17.02■□□□□ 0.32
CALCOCO1-220ENST00000552282 NOVA1P51513 510 aaKnown RBP17.02■□□□□ 0.32
CALCOCO1-220ENST00000552282 Q6ZNB5 142 aa17.02■□□□□ 0.32
CALCOCO1-220ENST00000552282 TMEM25Q86YD3 366 aa17.02■□□□□ 0.32
CALCOCO1-220ENST00000552282 GABRG3Q99928 467 aa17.02■□□□□ 0.32
CALCOCO1-220ENST00000552282 FBXO10Q9UK96 956 aa17.02■□□□□ 0.32
CALCOCO1-220ENST00000552282 PILRBQ9UKJ0 227 aa17.02■□□□□ 0.32
CALCOCO1-220ENST00000552282 INVSQ9Y283 1065 aa17.02■□□□□ 0.32
CALCOCO1-220ENST00000552282 TCRBV21S2A2A0A5A6 115 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 TBC1D3BA6NDS4 549 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 PATE3B3GLJ2 98 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 GFRA2O00451 464 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 HLA-DRAP01903 254 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 PFKFB1P16118 471 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 GABRG2P18507 467 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 NTSR1P30989 418 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 ATP5C1P36542 298 aaKnown RBP17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 PTGER3P43115 390 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 DHPSP49366 369 aaPredicted RBP17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 PSEN1P49768 467 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 IRX4P78413 519 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 DNM1Q05193 864 aaKnown RBP17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 GOLGA8FQ08AF8 430 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 GOLGA8DPQ0D2H9 430 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 PKP1Q13835 747 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 SLC36A4Q6YBV0 504 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 INTS8Q75QN2 995 aaKnown RBP17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 CCDC186Q7Z3E2 898 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 TWNKQ96RR1 684 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 TMEM121BQ9BXQ6 578 aaPredicted RBP17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 OSER1Q9NX31 292 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 CLIC5Q9NZA1 410 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 WDR35Q9P2L0 1181 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 FRMD4BQ9Y2L6 1034 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 USP3Q9Y6I4 520 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 FAM208BQ5VWN6 2430 aa17.01■□□□□ 0.31
CALCOCO1-220ENST00000552282 PCNX2A6NKB5 2137 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 GON4LQ3T8J9 2241 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 AP5Z1O43299 807 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 CALUO43852 315 aaPredicted RBP17■□□□□ 0.31
CALCOCO1-220ENST00000552282 CILPO75339 1184 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 PROS1P07225 676 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 PIK3CAP42336 1068 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 VAMP7P51809 220 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 KIF11P52732 1056 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 MAP3K7CLP57077 242 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 ZNF252P-AS1Q0IIN9 211 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 ZCWPW2Q504Y3 356 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 TRIM61Q5EBN2 209 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 C10orf76Q5T2E6 689 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 SH3PXD2AQ5TCZ1 1133 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 LYSMD4Q5XG99 296 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 GRAMD4Q6IC98 578 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 GPRIN1Q7Z2K8 1008 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 RABEPKQ7Z6M1 372 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 MIB1Q86YT6 1006 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 HSCBQ8IWL3 235 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 C12orf29Q8N999 325 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 CEP76Q8TAP6 659 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 HMGB4Q8WW32 186 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 RLN3Q8WXF3 142 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 XPO6Q96QU8 1125 aaKnown RBP17■□□□□ 0.31
CALCOCO1-220ENST00000552282 NT5C1AQ9BXI3 368 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 NUSAP1Q9BXS6 441 aaKnown RBP17■□□□□ 0.31
CALCOCO1-220ENST00000552282 IMPG2Q9BZV3 1241 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 NIF3L1Q9GZT8 377 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17■□□□□ 0.31
CALCOCO1-220ENST00000552282 LSM7Q9UK45 103 aaKnown RBP17■□□□□ 0.31
CALCOCO1-220ENST00000552282 AKAP13Q12802 2813 aa17■□□□□ 0.31
CALCOCO1-220ENST00000552282 ZNF217O75362 1048 aa16.99■□□□□ 0.31
CALCOCO1-220ENST00000552282 HOXB2P14652 356 aa16.99■□□□□ 0.31
CALCOCO1-220ENST00000552282 TYRP14679 529 aa16.99■□□□□ 0.31
CALCOCO1-220ENST00000552282 GTF2H1P32780 548 aa16.99■□□□□ 0.31
CALCOCO1-220ENST00000552282 ZNF132P52740 706 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms