RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 SCFD1Q8WVM8 642 aa15.37■□□□□ 0.05
VPS29-209ENST00000551655 REEP2Q9BRK0 252 aa15.37■□□□□ 0.05
VPS29-209ENST00000551655 ITM2CQ9NQX7 267 aa15.37■□□□□ 0.05
VPS29-209ENST00000551655 LARSQ9P2J5 1176 aaKnown RBP15.37■□□□□ 0.05
VPS29-209ENST00000551655 ANKRD6Q9Y2G4 727 aa15.37■□□□□ 0.05
VPS29-209ENST00000551655 SH3BP1Q9Y3L3 701 aa15.37■□□□□ 0.05
VPS29-209ENST00000551655 PCDHB6Q9Y5E3 794 aa15.37■□□□□ 0.05
VPS29-209ENST00000551655 UBR5O95071 2799 aaPredicted RBP15.37■□□□□ 0.05
VPS29-209ENST00000551655 H0YCG3 227 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 PLA2G4BP0C869 781 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 PCSK1P29120 753 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 HNF1BP35680 557 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 CCT8P50990 548 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 ST3GAL1Q11201 340 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 KCNH2Q12809 1159 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 RTP5Q14D33 572 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 ARHGAP40Q5TG30 622 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 C4orf50Q6ZRC1 276 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 NUDT18Q6ZVK8 323 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 ERICH1Q86X53 443 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 DDX42Q86XP3 938 aaKnown RBP eCLIP15.36■□□□□ 0.05
VPS29-209ENST00000551655 GATAD2AQ86YP4 633 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 CXorf38Q8TB03 319 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 KBTBD7Q8WVZ9 684 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 FGF11Q92914 225 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 BHMTQ93088 406 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 TMEM176AQ96HP8 235 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 TRIM4Q9C037 500 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 CCSER2Q9H7U1 834 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 KCNG1Q9UIX4 513 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 AGO2Q9UKV8 859 aaKnown RBP15.36■□□□□ 0.05
VPS29-209ENST00000551655 STON1Q9Y6Q2 735 aa15.36■□□□□ 0.05
VPS29-209ENST00000551655 TRAK2O60296 914 aa15.35■□□□□ 0.05
VPS29-209ENST00000551655 PDGFRBP09619 1106 aa15.35■□□□□ 0.05
VPS29-209ENST00000551655 TYRP14679 529 aa15.35■□□□□ 0.05
VPS29-209ENST00000551655 IL12RB1P42701 662 aa15.35■□□□□ 0.05
VPS29-209ENST00000551655 AFF3P51826 1226 aaKnown RBP15.35■□□□□ 0.05
VPS29-209ENST00000551655 PRAMEF14Q5SWL7 426 aa15.35■□□□□ 0.05
VPS29-209ENST00000551655 VSTM1Q6UX27 236 aa15.35■□□□□ 0.05
VPS29-209ENST00000551655 TPGS1Q6ZTW0 290 aa15.35■□□□□ 0.05
VPS29-209ENST00000551655 MYCT1Q8N699 235 aa15.35■□□□□ 0.05
VPS29-209ENST00000551655 KCNN1Q92952 543 aa15.35■□□□□ 0.05
VPS29-209ENST00000551655 OTUB2Q96DC9 234 aa15.35■□□□□ 0.05
VPS29-209ENST00000551655 P2RY11Q96G91 374 aa15.35■□□□□ 0.05
VPS29-209ENST00000551655 PCED1BQ96HM7 432 aa15.35■□□□□ 0.05
VPS29-209ENST00000551655 RAB34Q9BZG1 259 aa15.35■□□□□ 0.05
VPS29-209ENST00000551655 NRSN2Q9GZP1 204 aa15.35■□□□□ 0.05
VPS29-209ENST00000551655 C6orf106Q9H6K1 298 aaPredicted RBP15.35■□□□□ 0.05
VPS29-209ENST00000551655 NME7Q9Y5B8 376 aa15.35■□□□□ 0.05
VPS29-209ENST00000551655 ENC1O14682 589 aa15.34■□□□□ 0.05
VPS29-209ENST00000551655 PCDHGA12O60330 932 aa15.34■□□□□ 0.05
VPS29-209ENST00000551655 CACNG3O60359 315 aa15.34■□□□□ 0.05
VPS29-209ENST00000551655 RFPL3O75679 317 aa15.34■□□□□ 0.05
VPS29-209ENST00000551655 KRT19P08727 400 aa15.34■□□□□ 0.05
VPS29-209ENST00000551655 C6P13671 934 aa15.34■□□□□ 0.05
VPS29-209ENST00000551655 LHX1P48742 406 aa15.34■□□□□ 0.05
VPS29-209ENST00000551655 NOP14P78316 857 aaKnown RBP15.34■□□□□ 0.05
VPS29-209ENST00000551655 DHX8Q14562 1220 aaKnown RBP15.34■□□□□ 0.05
VPS29-209ENST00000551655 MDH1BQ5I0G3 518 aa15.34■□□□□ 0.05
VPS29-209ENST00000551655 METTL3Q86U44 580 aaKnown RBP15.34■□□□□ 0.05
VPS29-209ENST00000551655 CSGALNACT2Q8N6G5 542 aa15.34■□□□□ 0.05
VPS29-209ENST00000551655 TOP6BLQ8N6T0 577 aa15.34■□□□□ 0.05
VPS29-209ENST00000551655 FIZ1Q96SL8 496 aa15.34■□□□□ 0.05
VPS29-209ENST00000551655 LGMNQ99538 433 aa15.34■□□□□ 0.05
VPS29-209ENST00000551655 BBS2Q9BXC9 721 aa15.34■□□□□ 0.05
VPS29-209ENST00000551655 TM9SF3Q9HD45 589 aa15.34■□□□□ 0.05
VPS29-209ENST00000551655 GDAP2Q9NXN4 497 aa15.34■□□□□ 0.05
VPS29-209ENST00000551655 SIX4Q9UIU6 781 aa15.34■□□□□ 0.05
VPS29-209ENST00000551655 CISD3P0C7P0 127 aa15.33■□□□□ 0.04
VPS29-209ENST00000551655 PPP3CCP48454 512 aa15.33■□□□□ 0.04
VPS29-209ENST00000551655 TOB1P50616 345 aaPredicted RBP15.33■□□□□ 0.04
VPS29-209ENST00000551655 STARD3Q14849 445 aa15.33■□□□□ 0.04
VPS29-209ENST00000551655 TDRD10Q5VZ19 366 aaKnown RBP15.33■□□□□ 0.04
VPS29-209ENST00000551655 TMPRSS6Q8IU80 811 aa15.33■□□□□ 0.04
VPS29-209ENST00000551655 IGSF8Q969P0 613 aa15.33■□□□□ 0.04
VPS29-209ENST00000551655 SIPA1Q96FS4 1042 aa15.33■□□□□ 0.04
VPS29-209ENST00000551655 SLITRK1Q96PX8 696 aa15.33■□□□□ 0.04
VPS29-209ENST00000551655 ZHX3Q9H4I2 956 aa15.33■□□□□ 0.04
VPS29-209ENST00000551655 PLK2Q9NYY3 685 aa15.33■□□□□ 0.04
VPS29-209ENST00000551655 CHORDC1Q9UHD1 332 aaPredicted RBP15.33■□□□□ 0.04
VPS29-209ENST00000551655 CDH9Q9ULB4 789 aa15.33■□□□□ 0.04
VPS29-209ENST00000551655 PLXNA2O75051 1894 aa15.33■□□□□ 0.04
VPS29-209ENST00000551655 MYH10P35580 1976 aa15.33■□□□□ 0.04
VPS29-209ENST00000551655 BOD1L1Q8NFC6 3051 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 USP9XQ93008 2570 aaPredicted RBP15.32■□□□□ 0.04
VPS29-209ENST00000551655 GFRA2O00451 464 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 FAM13AO94988 1023 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 IL18RAPO95256 599 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 ADSSP30520 456 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 DGKGP49619 791 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 ACADVLP49748 655 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 COPAP53621 1224 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 RHDQ02161 417 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 COLEC12Q5KU26 742 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 HYIQ5T013 277 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 FBXL19Q6PCT2 694 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 HS2ST1Q7LGA3 356 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 PRICKLE2Q7Z3G6 844 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 GPBP1Q86WP2 473 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 LRRC52Q8N7C0 313 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms