RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 MDM4O15151 490 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 GRAP2O75791 330 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 GJB6O95452 261 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 DDX6P26196 483 aaKnown RBP eCLIP13.67□□□□□ -0.22
RAB5C-206ENST00000550406 WEE1P30291 646 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 NSFP46459 744 aaKnown RBP13.67□□□□□ -0.22
RAB5C-206ENST00000550406 PSEN1P49768 467 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 TUBP50607 506 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 GSCP56915 257 aaPredicted RBP13.67□□□□□ -0.22
RAB5C-206ENST00000550406 ZP2Q05996 745 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 C1QBPQ07021 282 aaKnown RBP13.67□□□□□ -0.22
RAB5C-206ENST00000550406 SLC18A3Q16572 532 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 ARHGAP15Q53QZ3 475 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 SYPL2Q5VXT5 272 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 TRNP1Q6NT89 227 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 OTOP3Q7RTS5 596 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 ARID3BQ8IVW6 561 aaPredicted RBP13.67□□□□□ -0.22
RAB5C-206ENST00000550406 CMTM8Q8IZV2 173 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 RIN3Q8TB24 985 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 IPO4Q8TEX9 1081 aaKnown RBP13.67□□□□□ -0.22
RAB5C-206ENST00000550406 EDEM1Q92611 657 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 WBP2Q969T9 261 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 ZFRQ96KR1 1074 aaKnown RBP13.67□□□□□ -0.22
RAB5C-206ENST00000550406 ASB16Q96NS5 453 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 RPP25Q9BUL9 199 aaKnown RBP13.67□□□□□ -0.22
RAB5C-206ENST00000550406 PLA2G2FQ9BZM2 168 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 SMG9Q9H0W8 520 aaKnown RBP13.67□□□□□ -0.22
RAB5C-206ENST00000550406 TMEM59LQ9UK28 342 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 NAALADL1Q9UQQ1 740 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 FAM50BQ9Y247 325 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 CCL26Q9Y258 94 aa13.67□□□□□ -0.22
RAB5C-206ENST00000550406 GOLGA8SH3BPF8 625 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 TLR5O60602 858 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 PRAMEF12O95522 483 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 HDCP19113 662 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 SCNN1AP37088 669 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 YWHAZP63104 245 aaKnown RBP13.66□□□□□ -0.22
RAB5C-206ENST00000550406 PITX1P78337 314 aaPredicted RBP13.66□□□□□ -0.22
RAB5C-206ENST00000550406 SLC7A9P82251 487 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 MTF1Q14872 753 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 EFHC1Q5JVL4 640 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 PPP1R15BQ5SWA1 713 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 CCDC122Q5T0U0 273 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 BTBD8Q5XKL5 378 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 TANGO2Q6ICL3 276 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 ALKBH5Q6P6C2 394 aaKnown RBP13.66□□□□□ -0.22
RAB5C-206ENST00000550406 PARM1Q6UWI2 310 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 RAD9BQ6WBX8 426 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 SLC26A9Q7LBE3 791 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 ADHFE1Q8IWW8 467 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 ZDHHC14Q8IZN3 488 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 ARHGAP18Q8N392 663 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 ZSCAN18Q8TBC5 510 aaPredicted RBP13.66□□□□□ -0.22
RAB5C-206ENST00000550406 ADAMTS19Q8TE59 1207 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 SMARCD2Q92925 531 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 USP13Q92995 863 aaPredicted RBP13.66□□□□□ -0.22
RAB5C-206ENST00000550406 VCPIP1Q96JH7 1222 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 PDLIM2Q96JY6 352 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 SLC2A13Q96QE2 648 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 ADAM33Q9BZ11 813 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 SYNCQ9H7C4 482 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 TRPV4Q9HBA0 871 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 ABCC13Q9NSE7 274 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 SPTLC3Q9NUV7 552 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 ASNSD1Q9NWL6 643 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 LIMD1Q9UGP4 676 aa13.66□□□□□ -0.22
RAB5C-206ENST00000550406 ZFP37Q9Y6Q3 630 aaPredicted RBP13.66□□□□□ -0.22
RAB5C-206ENST00000550406 TRAV19A0A0A6YYK7 116 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 SOWAHDA6NJG2 315 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 ANHXE9PGG2 379 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 SART1O43290 800 aaKnown RBP13.65□□□□□ -0.22
RAB5C-206ENST00000550406 ATMINO43313 823 aaPredicted RBP13.65□□□□□ -0.22
RAB5C-206ENST00000550406 AKR1B10O60218 316 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 CALB1P05937 261 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 GLI1P08151 1106 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 RALAP11233 206 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 PFKLP17858 780 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 RRM1P23921 792 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 VIPR2P41587 438 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 SNX16P57768 344 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 HTR4Q13639 388 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 MSANTD2Q6P1R3 559 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 KLHDC10Q6PID8 442 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 BEND5Q7L4P6 421 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 VPS36Q86VN1 386 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 ZDHHC17Q8IUH5 632 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.65□□□□□ -0.22
RAB5C-206ENST00000550406 DEFB106AQ8N104 65 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 TDRD5Q8NAT2 981 aaKnown RBP13.65□□□□□ -0.22
RAB5C-206ENST00000550406 MSANTD4Q8NCY6 345 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 JOSD2Q8TAC2 188 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 RSAD2Q8WXG1 361 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 FGF14Q92915 247 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 FAM149B1Q96BN6 582 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 ACSF2Q96CM8 615 aaPredicted RBP13.65□□□□□ -0.22
RAB5C-206ENST00000550406 CCDC42Q96M95 316 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 KLF16Q9BXK1 252 aaPredicted RBP13.65□□□□□ -0.22
RAB5C-206ENST00000550406 PACSIN1Q9BY11 444 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 SLITRK6Q9H5Y7 841 aa13.65□□□□□ -0.22
RAB5C-206ENST00000550406 CD320Q9NPF0 282 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms