RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 EFCAB12Q6NXP0 572 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 DPP9Q86TI2 863 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 TTC7BQ86TV6 843 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 PHF13Q86YI8 300 aaPredicted RBP10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 CCDC60Q8IWA6 550 aaPredicted RBP10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 C12orf56Q8IXR9 622 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 DDIASQ8IXT1 998 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 GSTCDQ8NEC7 633 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 ASAP3Q8TDY4 903 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 PBXIP1Q96AQ6 731 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 WRAP73Q9P2S5 460 aaPredicted RBP10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 SUN2Q9UH99 717 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 SNX13Q9Y5W8 968 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 SNED1Q8TER0 1413 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 IGKV6D-41A0A0C4DH26 115 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 WDR27A2RRH5 827 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 EIF4BP23588 611 aaKnown RBP10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 HOXA10P31260 410 aaPredicted RBP10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 AVPR1AP37288 418 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 MPP2Q14168 576 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 PDK2Q15119 407 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 MAPRE2Q15555 327 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 LRRC38Q5VT99 294 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 PIWIL2Q8TC59 973 aaKnown RBP10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 UNKQ9C0B0 810 aaKnown RBP10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 CCDC90BQ9GZT6 254 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 BAG5Q9UL15 447 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 RPL26L1Q9UNX3 145 aaKnown RBP10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 TBC1D12O60347 775 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 FAM155BO75949 473 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 IL18RAPO95256 599 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 HMGCRP04035 888 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 SERPINE1P05121 402 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 TXNP10599 105 aaKnown RBP10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 IL10P22301 178 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 ABCG1P45844 678 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 HDAC4P56524 1084 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 PDK1Q15118 436 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 STILQ15468 1287 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 ANKRD22Q5VYY1 191 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 BBS12Q6ZW61 710 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 NIPA1Q7RTP0 329 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 STRA8Q7Z7C7 330 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 RBM15BQ8NDT2 890 aaKnown RBP10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 UCMAQ8WVF2 138 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 PTPRN2Q92932 1015 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 TMEM176AQ96HP8 235 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 L3MBTL3Q96JM7 780 aaPredicted RBP10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 PHACTR1Q9C0D0 580 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 LZTS1Q9Y250 596 aa10.56□□□□□ -0.72
SMARCC2-209ENST00000550164 SCN11AQ9UI33 1791 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 TMEM191CA6NGB0 347 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 SPDYE5A6NIY4 337 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 DFFAO00273 331 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 GSTA4O15217 222 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 PEX11AO75192 247 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 SMNDC1O75940 238 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 MTA2O94776 668 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 VDRP11473 427 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 PSMC3P17980 439 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 PLOD1Q02809 727 aaPredicted RBP10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 TAF12Q16514 161 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 UBAP2Q5T6F2 1119 aaKnown RBP10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 SEL1L3Q68CR1 1132 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 C4orf22Q6V702 233 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 DAW1Q8N136 415 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 CYGBQ8WWM9 190 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 PRPF18Q99633 342 aaKnown RBP10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 ECSITQ9BQ95 431 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 ASCC2Q9H1I8 757 aaPredicted RBP10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 MMADHCQ9H3L0 296 aaPredicted RBP10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 EFCAB1Q9HAE3 211 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 TCF7L2Q9NQB0 619 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 KRT82Q9NSB4 513 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 WASF2Q9Y6W5 498 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 C3orf70A6NLC5 250 aaPredicted RBP10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 EEF2KO00418 725 aaKnown RBP10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 RGL2O15211 777 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 CYP2F1P24903 491 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 NCKAP1LP55160 1127 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 PKNOX1P55347 436 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 MRPS22P82650 360 aaKnown RBP10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 PDAP1Q13442 181 aaKnown RBP10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 FAM182AQ5T1J6 154 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 NET1Q7Z628 596 aaPredicted RBP10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 SETD3Q86TU7 594 aaPredicted RBP10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 NUP93Q8N1F7 819 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 OR6Y1Q8NGX8 325 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 SH3TC2Q8TF17 1288 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 SEC14L1Q92503 715 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 MFSD14AQ96MC6 490 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 ZMYND8Q9ULU4 1186 aaPredicted RBP10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 NOD1Q9Y239 953 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 MOCS2O96007 188 aaPredicted RBP10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 MT-CO1P00395 513 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 POU5F1Q01860 360 aaKnown RBP10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 TMEM62Q0P6H9 643 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 FNBP1LQ5T0N5 605 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 RINLQ6ZS11 566 aa10.55□□□□□ -0.72
SMARCC2-209ENST00000550164 CCNJLQ8IV13 435 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms