RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 SASS6Q6UVJ0 657 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 MAMSTRQ6ZN01 415 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 SPEM1Q8N4L4 309 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 ZNF276Q8N554 614 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 UBA3Q8TBC4 463 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 ULBP1Q9BZM6 244 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 NDST4Q9H3R1 872 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 NFE2L3Q9Y4A8 694 aa18.11■□□□□ 0.49
CHMP1A-208ENST00000550102 RIF1Q5UIP0 2472 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-208ENST00000550102 SLC9A1P19634 815 aa18.1■□□□□ 0.49
CHMP1A-208ENST00000550102 DRD1P21728 446 aa18.1■□□□□ 0.49
CHMP1A-208ENST00000550102 EEF1GP26641 437 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-208ENST00000550102 YWHAGP61981 247 aaKnown RBP eCLIP18.1■□□□□ 0.49
CHMP1A-208ENST00000550102 GAS6Q14393 721 aa18.1■□□□□ 0.49
CHMP1A-208ENST00000550102 VWA3BQ502W6 1294 aa18.1■□□□□ 0.49
CHMP1A-208ENST00000550102 NAIF1Q69YI7 327 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-208ENST00000550102 RSRC2Q7L4I2 434 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-208ENST00000550102 KCTD13Q8WZ19 329 aa18.1■□□□□ 0.49
CHMP1A-208ENST00000550102 CD101Q93033 1021 aa18.1■□□□□ 0.49
CHMP1A-208ENST00000550102 ZSWIM1Q9BR11 485 aa18.1■□□□□ 0.49
CHMP1A-208ENST00000550102 KLF16Q9BXK1 252 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-208ENST00000550102 ANO10Q9NW15 660 aa18.1■□□□□ 0.49
CHMP1A-208ENST00000550102 LSM7Q9UK45 103 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-208ENST00000550102 FAM186AA6NE01 2351 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 PES1O00541 588 aaKnown RBP18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 MDM4O15151 490 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 CALCAP01258 141 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 ADH5P11766 374 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 PON1P27169 355 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 DHCR24Q15392 516 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 FBXO43Q4G163 708 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 TCP11X2Q5H9J9 407 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 MIIPQ5JXC2 388 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 PM20D1Q6GTS8 502 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 GJB7Q6PEY0 223 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 MIB1Q86YT6 1006 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 BBS7Q8IWZ6 715 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 ENOX1Q8TC92 643 aaKnown RBP18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 SECISBP2LQ93073 1101 aaKnown RBP18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 FAM126AQ9BYI3 521 aaPredicted RBP18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 CNGB3Q9NQW8 809 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 SAMSN1Q9NSI8 373 aaKnown RBP18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 RASAL2Q9UJF2 1139 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 NUDT5Q9UKK9 219 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 R4GN57 208 aa18.09■□□□□ 0.49
CHMP1A-208ENST00000550102 MED7O43513 233 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 EGFP01133 1207 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 CXCL12P48061 93 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 GALK1P51570 392 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 SATB1Q01826 763 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 APBA1Q02410 837 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 MEA1Q16626 185 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 ARHGAP44Q17R89 818 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 GAB4Q2WGN9 574 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 SMYD5Q6GMV2 418 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 HTR3DQ70Z44 454 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 BHLHA9Q7RTU4 235 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 ADGRG2Q8IZP9 1017 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 SCML4Q8N228 414 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 SHC3Q92529 594 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 NKD2Q969F2 451 aaPredicted RBP18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 WBP2Q969T9 261 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 OLA1Q9NTK5 396 aaKnown RBP18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 STRIP2Q9ULQ0 834 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 PCDHGA2Q9Y5H1 932 aa18.08■□□□□ 0.48
CHMP1A-208ENST00000550102 ZNF292O60281 2723 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 MYO15AQ9UKN7 3530 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 THAP12O43422 761 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 GFRA3O60609 400 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 LETM1O95202 739 aaPredicted RBP18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 PAPSS2O95340 614 aaPredicted RBP18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 LCP1P13796 627 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 GNA15P30679 374 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 USP8P40818 1118 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 OPRD1P41143 372 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 EIF2DP41214 584 aaKnown RBP18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 RGS7P49802 495 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 EFEMP1Q12805 493 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 LY6G5CQ5SRR4 150 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 CDKAL1Q5VV42 579 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 PMF1Q6P1K2 205 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 RHBDF2Q6PJF5 856 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 TSSK4Q6SA08 328 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 C11orf57Q6ZUT1 292 aaPredicted RBP18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 SLC35F5Q8WV83 523 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 SEMA4AQ9H3S1 761 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 FBRSL1Q9HCM7 1045 aaKnown RBP18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 SIX2Q9NPC8 291 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 ZSCAN32Q9NX65 697 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 MARCH2Q9P0N8 246 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 USP34Q70CQ2 3546 aa18.07■□□□□ 0.48
CHMP1A-208ENST00000550102 FRYLO94915 3013 aa18.06■□□□□ 0.48
CHMP1A-208ENST00000550102 GVINP1Q7Z2Y8 2422 aa18.06■□□□□ 0.48
CHMP1A-208ENST00000550102 PRR23AA6NEV1 266 aa18.06■□□□□ 0.48
CHMP1A-208ENST00000550102 BECN2A8MW95 431 aa18.06■□□□□ 0.48
CHMP1A-208ENST00000550102 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.06■□□□□ 0.48
CHMP1A-208ENST00000550102 HOXC11O43248 304 aaPredicted RBP18.06■□□□□ 0.48
CHMP1A-208ENST00000550102 GREM1O60565 184 aa18.06■□□□□ 0.48
CHMP1A-208ENST00000550102 RNF40O75150 1001 aa18.06■□□□□ 0.48
CHMP1A-208ENST00000550102 STC2O76061 302 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms