RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 C18orf25Q96B23 403 aaPredicted RBP9.3□□□□□ -0.92
TMEM116-209ENST00000550020 MTBPQ96DY7 904 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 PEBP4Q96S96 227 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 PAFAH2Q99487 392 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 HNRNPABQ99729 332 aaKnown RBP9.3□□□□□ -0.92
TMEM116-209ENST00000550020 APBA2Q99767 749 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 DHRS4Q9BTZ2 278 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 SNRNP25Q9BV90 132 aaKnown RBP9.3□□□□□ -0.92
TMEM116-209ENST00000550020 EIF2AQ9BY44 585 aaKnown RBP9.3□□□□□ -0.92
TMEM116-209ENST00000550020 NXF3Q9H4D5 531 aaKnown RBP9.3□□□□□ -0.92
TMEM116-209ENST00000550020 NRDE2Q9H7Z3 1164 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 SPC25Q9HBM1 224 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 LRRC4Q9HBW1 653 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 RAB6BQ9NRW1 208 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 FGFR1OP2Q9NVK5 253 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 RRN3Q9NYV6 651 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 SAE1Q9UBE0 346 aaPredicted RBP9.3□□□□□ -0.92
TMEM116-209ENST00000550020 ZNF180Q9UJW8 692 aa9.3□□□□□ -0.92
TMEM116-209ENST00000550020 SF3B1O75533 1304 aaKnown RBP eCLIP9.3□□□□□ -0.923e-7■■■■■ 114.9
TMEM116-209ENST00000550020 GOLGA8MH3BSY2 632 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 HNRNPCL1O60812 293 aaKnown RBP9.29□□□□□ -0.92
TMEM116-209ENST00000550020 KRT38O76015 456 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 ASMTLO95671 621 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 OAS1P00973 400 aaKnown RBP9.29□□□□□ -0.92
TMEM116-209ENST00000550020 ZNF865P0CJ78 1059 aaPredicted RBP9.29□□□□□ -0.92
TMEM116-209ENST00000550020 MLNP12872 115 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 AKR1A1P14550 325 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 CYP2F1P24903 491 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 CNTFP26441 200 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 ADORA2BP29275 332 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 SKIV2L2P42285 1042 aaKnown RBP9.29□□□□□ -0.92
TMEM116-209ENST00000550020 SERPINB9P50453 376 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 GDF10P55107 478 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 GPX6P59796 221 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 YWHAGP61981 247 aaKnown RBP eCLIP9.29□□□□□ -0.92
TMEM116-209ENST00000550020 YWHAZP63104 245 aaKnown RBP9.29□□□□□ -0.92
TMEM116-209ENST00000550020 ADAM17P78536 824 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 TMEM62Q0P6H9 643 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 TAF1CQ15572 869 aaPredicted RBP9.29□□□□□ -0.92
TMEM116-209ENST00000550020 C15orf59Q2T9L4 293 aaPredicted RBP9.29□□□□□ -0.92
TMEM116-209ENST00000550020 SLC25A52Q3SY17 297 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 SPDYAQ5MJ70 313 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 FNBP1LQ5T0N5 605 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 HEATR6Q6AI08 1181 aaKnown RBP9.29□□□□□ -0.92
TMEM116-209ENST00000550020 CYP4V2Q6ZWL3 525 aaPredicted RBP9.29□□□□□ -0.92
TMEM116-209ENST00000550020 LIMS2Q7Z4I7 341 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 CCDC91Q7Z6B0 441 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 PRUNE1Q86TP1 453 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 SLC26A11Q86WA9 606 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 SUGP1Q8IWZ8 645 aaKnown RBP9.29□□□□□ -0.92
TMEM116-209ENST00000550020 SIX6OS1Q8N1H7 587 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 DENND1AQ8TEH3 1009 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 KAT2BQ92831 832 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 ZMAT2Q96NC0 199 aaKnown RBP9.29□□□□□ -0.92
TMEM116-209ENST00000550020 QKIQ96PU8 341 aaKnown RBP eCLIP9.29□□□□□ -0.929e-7■■■■■ 39
TMEM116-209ENST00000550020 SLC9A7Q96T83 725 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 PAIP2Q9BPZ3 127 aaKnown RBP9.29□□□□□ -0.92
TMEM116-209ENST00000550020 NAT9Q9BTE0 207 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 APOL6Q9BWW8 343 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 DUSP16Q9BY84 665 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 OSBPL7Q9BZF2 842 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 IQCGQ9H095 443 aaKnown RBP9.29□□□□□ -0.92
TMEM116-209ENST00000550020 BRD8Q9H0E9 1235 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 VPS11Q9H270 941 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 DHX35Q9H5Z1 703 aaKnown RBP9.29□□□□□ -0.92
TMEM116-209ENST00000550020 RXFP1Q9HBX9 757 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 TXLNGQ9NUQ3 528 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 GTF2IRD1Q9UHL9 959 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 SLC12A4Q9UP95 1085 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 AP4E1Q9UPM8 1137 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 IPPQ9Y573 584 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 HEY1Q9Y5J3 304 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 USH1CQ9Y6N9 552 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 PLXNA1Q9UIW2 1896 aa9.29□□□□□ -0.92
TMEM116-209ENST00000550020 ANK1P16157 1881 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 RALGAPA2Q2PPJ7 1873 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 AP3B1O00203 1094 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 PPP1R12AO14974 1030 aaPredicted RBP9.28□□□□□ -0.92
TMEM116-209ENST00000550020 NCAM2O15394 837 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 MTSS1O43312 755 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 TYROBPO43914 113 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 GRAP2O75791 330 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 FAM155BO75949 473 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 F9P00740 461 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 LCP1P13796 627 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 KRT4P19013 534 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 TAC1P20366 129 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 GCAP28676 217 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 SSTR1P30872 391 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 L1CAMP32004 1257 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 RPL9P32969 192 aaKnown RBP9.28□□□□□ -0.92
TMEM116-209ENST00000550020 NOS2P35228 1153 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 ELK3P41970 407 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 SULT1E1P49888 294 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 RASSF2P50749 326 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 RAB27AP51159 221 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 HDAC4P56524 1084 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 MMRN1Q13201 1228 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 NAB1Q13506 487 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 FASTKD3Q14CZ7 662 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms