RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 SLC16A3O15427 465 aaKnown RBP20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 KLF8O95600 359 aaPredicted RBP20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 RARGP13631 454 aa20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 EIF2DP41214 584 aaKnown RBP20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 KIF11P52732 1056 aa20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 RAD23BP54727 409 aa20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 EMC10Q5UCC4 262 aa20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 BTBD8Q5XKL5 378 aa20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 TMEM25Q86YD3 366 aa20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 ALLCQ8N6M5 410 aa20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 SLC4A11Q8NBS3 891 aa20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 TMEM176AQ96HP8 235 aa20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 TIGD1Q96MW7 591 aa20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 PNPLA8Q9NP80 782 aa20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 CYLDQ9NQC7 956 aa20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 SPHK2Q9NRA0 654 aa20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 HOOK1Q9UJC3 728 aaKnown RBP20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 MMP17Q9ULZ9 603 aa20.61■□□□□ 0.89
SLC48A1-207ENST00000549243 GDF9O60383 454 aa20.6■□□□□ 0.89
SLC48A1-207ENST00000549243 SDHBP21912 280 aa20.6■□□□□ 0.89
SLC48A1-207ENST00000549243 MRPS21P82921 87 aaKnown RBP20.6■□□□□ 0.89
SLC48A1-207ENST00000549243 LRRC63Q05C16 580 aa20.6■□□□□ 0.89
SLC48A1-207ENST00000549243 C10orf120Q5SQS8 335 aa20.6■□□□□ 0.89
SLC48A1-207ENST00000549243 ANO7Q6IWH7 933 aa20.6■□□□□ 0.89
SLC48A1-207ENST00000549243 ZC3H3Q8IXZ2 948 aaKnown RBP20.6■□□□□ 0.89
SLC48A1-207ENST00000549243 TXNDC5Q8NBS9 432 aaKnown RBP20.6■□□□□ 0.89
SLC48A1-207ENST00000549243 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.6■□□□□ 0.89
SLC48A1-207ENST00000549243 ARMCX3Q9UH62 379 aaPredicted RBP20.6■□□□□ 0.89
SLC48A1-207ENST00000549243 EBF1Q9UH73 591 aa20.6■□□□□ 0.89
SLC48A1-207ENST00000549243 DCDC2BA2VCK2 349 aa20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 TULP3O75386 442 aa20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 EPN2O95208 641 aa20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 HNRNPLP14866 589 aaKnown RBP eCLIP20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 GRIA2P42262 883 aa20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 GOLGA8FQ08AF8 430 aa20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 GOLGA8DPQ0D2H9 430 aa20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 LRMPQ12912 555 aa20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 SF3A2Q15428 464 aaKnown RBP20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 CRY1Q16526 586 aa20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 PLK5Q496M5 336 aa20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 TMEM92Q6UXU6 159 aa20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 HTR3DQ70Z44 454 aa20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 SCD5Q86SK9 330 aa20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 PHTF2Q8N3S3 785 aa20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 TTC39CQ8N584 583 aa20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 IL17RCQ8NAC3 791 aa20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 LSM7Q9UK45 103 aaKnown RBP20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 MAN1B1Q9UKM7 699 aa20.59■□□□□ 0.89
SLC48A1-207ENST00000549243 TBC1D3BA6NDS4 549 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 SGK1O00141 431 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 PSMA7O14818 248 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 TRIM24O15164 1050 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 HOXC11O43248 304 aaPredicted RBP20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 GREM1O60565 184 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 CD44P16070 742 aaKnown RBP20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 GBP1P32455 592 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 STIM1Q13586 685 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 KLHL10Q6JEL2 608 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 TPGS1Q6ZTW0 290 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 CCDC186Q7Z3E2 898 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 MIB1Q86YT6 1006 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 ETFBKMTQ8IXQ9 262 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 SLC35C1Q96A29 364 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 FAXDC2Q96IV6 333 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 LOXL4Q96JB6 756 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 DUSP15Q9H1R2 295 aaPredicted RBP20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 SMOC1Q9H4F8 434 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 DEC1Q9P2X7 70 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 DNMT3LQ9UJW3 386 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 COQ4Q9Y3A0 265 aa20.58■□□□□ 0.89
SLC48A1-207ENST00000549243 NEDD8-MDP1E9PL57 170 aa20.57■□□□□ 0.88
SLC48A1-207ENST00000549243 KIR2DL1P43626 348 aaPredicted RBP20.57■□□□□ 0.88
SLC48A1-207ENST00000549243 CUL2Q13617 745 aa20.57■□□□□ 0.88
SLC48A1-207ENST00000549243 ELF2Q15723 593 aa20.57■□□□□ 0.88
SLC48A1-207ENST00000549243 GOLGA7BQ2TAP0 167 aa20.57■□□□□ 0.88
SLC48A1-207ENST00000549243 PIGZQ86VD9 579 aa20.57■□□□□ 0.88
SLC48A1-207ENST00000549243 MDGA1Q8NFP4 955 aa20.57■□□□□ 0.88
SLC48A1-207ENST00000549243 NETO1Q8TDF5 533 aa20.57■□□□□ 0.88
SLC48A1-207ENST00000549243 ZC3H10Q96K80 434 aaKnown RBP20.57■□□□□ 0.88
SLC48A1-207ENST00000549243 DUSP9Q99956 384 aaKnown RBP20.57■□□□□ 0.88
SLC48A1-207ENST00000549243 RTKNQ9BST9 563 aa20.57■□□□□ 0.88
SLC48A1-207ENST00000549243 BBS2Q9BXC9 721 aa20.57■□□□□ 0.88
SLC48A1-207ENST00000549243 GTPBP4Q9BZE4 634 aaKnown RBP20.57■□□□□ 0.88
SLC48A1-207ENST00000549243 CIZ1Q9ULV3 898 aaPredicted RBP20.57■□□□□ 0.88
SLC48A1-207ENST00000549243 USP3Q9Y6I4 520 aa20.57■□□□□ 0.88
SLC48A1-207ENST00000549243 CNOT1A5YKK6 2376 aaKnown RBP20.56■□□□□ 0.88
SLC48A1-207ENST00000549243 A0A0A0MRY4 1105 aa20.56■□□□□ 0.88
SLC48A1-207ENST00000549243 GADD45BO75293 160 aaPredicted RBP20.56■□□□□ 0.88
SLC48A1-207ENST00000549243 HMBSP08397 361 aa20.56■□□□□ 0.88
SLC48A1-207ENST00000549243 CHRM1P11229 460 aaPredicted RBP20.56■□□□□ 0.88
SLC48A1-207ENST00000549243 RALAP11233 206 aa20.56■□□□□ 0.88
SLC48A1-207ENST00000549243 TNFRSF4P43489 277 aa20.56■□□□□ 0.88
SLC48A1-207ENST00000549243 PLA2G4AP47712 749 aa20.56■□□□□ 0.88
SLC48A1-207ENST00000549243 PSEN1P49768 467 aa20.56■□□□□ 0.88
SLC48A1-207ENST00000549243 CCDC40Q4G0X9 1142 aa20.56■□□□□ 0.88
SLC48A1-207ENST00000549243 AASDHQ4L235 1098 aaPredicted RBP20.56■□□□□ 0.88
SLC48A1-207ENST00000549243 USP39Q53GS9 565 aaKnown RBP20.56■□□□□ 0.88
SLC48A1-207ENST00000549243 C10orf76Q5T2E6 689 aa20.56■□□□□ 0.88
SLC48A1-207ENST00000549243 ARHGAP17Q68EM7 881 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms