RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	ZDHHC11B	P0C7U3	371 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	TNNT1	P13805	278 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	HOXA9	P31269	272 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	NOS2	P35228	1153 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	SLC1A1	P43005	524 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	NRIP1	P48552	1158 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	PSEN1	P49768	467 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	ACAP1	Q15027	740 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	TAF12	Q16514	161 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	CCDC14	Q49A88	953 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	DCAF6	Q58WW2	860 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	PRPF38B	Q5VTL8	546 aa	Known RBP	12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	ELMSAN1	Q6PJG2	1045 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	SYT10	Q6XYQ8	523 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	PEX26	Q7Z412	305 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	NT5DC3	Q86UY8	548 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	CPNE8	Q86YQ8	564 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	DEFB106A	Q8N104	65 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	PDZD8	Q8NEN9	1154 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	UBE2Q2	Q8WVN8	375 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	NT5C3B	Q969T7	300 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	NMUR1	Q9HB89	426 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	TLR8	Q9NR97	1041 aa	Known RBP	12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	ABCC13	Q9NSE7	274 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	RRN3	Q9NYV6	651 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	CLIC5	Q9NZA1	410 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	MAGED2	Q9UNF1	606 aa	Predicted RBP	12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	JRKL	Q9Y4A0	524 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	HCFC2	Q9Y5Z7	792 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	PRUNE2	Q8WUY3	3088 aa		12.79	□□□□□ -0.36
ERBB3-208	ENST00000549205	CAPN9	O14815	690 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	FANCG	O15287	622 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	SPOP	O43791	374 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	HNRNPA1	P09651	372 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	NCAM1	P13591	858 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	DES	P17661	470 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	COMT	P21964	271 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	PGF	P49763	221 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	SLC25A52	Q3SY17	297 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	MEI1	Q5TIA1	1274 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	SYPL2	Q5VXT5	272 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	BTBD8	Q5XKL5	378 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	ELMOD1	Q8N336	334 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	EDEM1	Q92611	657 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	CENPI	Q92674	756 aa	Predicted RBP	12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	CD101	Q93033	1021 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	ZNF512	Q96ME7	567 aa	Predicted RBP	12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	CFAP57	Q96MR6	1250 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	NPY6R	Q99463	290 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	NAPG	Q99747	312 aa	Predicted RBP	12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	TTYH1	Q9H313	450 aa	Predicted RBP	12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	NSUN3	Q9H649	340 aa	Known RBP	12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	ZNF334	Q9HCZ1	680 aa	Predicted RBP	12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	OSER1	Q9NX31	292 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	LMCD1	Q9NZU5	365 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	UXT	Q9UBK9	157 aa	Predicted RBP	12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	DNAI1	Q9UI46	699 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	AMFR	Q9UKV5	643 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	STAP1	Q9ULZ2	295 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	NAALADL1	Q9UQQ1	740 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	UST	Q9Y2C2	406 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	HYOU1	Q9Y4L1	999 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	DOCK4	Q8N1I0	1966 aa		12.78	□□□□□ -0.36
ERBB3-208	ENST00000549205	CTAGE9	A4FU28	777 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	CCL16	O15467	120 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	RFPL2	O75678	378 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	RNF8	O76064	485 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	POU2F2	P09086	479 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	TFE3	P19532	575 aa	Predicted RBP	12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	CASQ1	P31415	396 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	PPP3CC	P48454	512 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	SULT1E1	P49888	294 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	ATP11A	P98196	1134 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	KCNC3	Q14003	757 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	CDO1	Q16878	200 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	C15orf59	Q2T9L4	293 aa	Predicted RBP	12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	OTUD1	Q5VV17	481 aa	Predicted RBP	12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	SNX30	Q5VWJ9	437 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	CC2D1A	Q6P1N0	951 aa	Predicted RBP	12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	MSANTD2	Q6P1R3	559 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	STRADA	Q7RTN6	431 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	BNIPL	Q7Z465	357 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	ZNF276	Q8N554	614 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	ARFGAP1	Q8N6T3	406 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	RNF139	Q8WU17	664 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	FAM172A	Q8WUF8	416 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	TBCB	Q99426	244 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	NCAPG	Q9BPX3	1015 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	TLR10	Q9BXR5	811 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	ADAM33	Q9BZ11	813 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	PRDM12	Q9H4Q4	367 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	ZDHHC7	Q9NXF8	308 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	TRPM5	Q9NZQ8	1165 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	NUP205	Q92621	2012 aa		12.77	□□□□□ -0.37
ERBB3-208	ENST00000549205	ZNF840P	A6NDX5	716 aa		12.76	□□□□□ -0.37
ERBB3-208	ENST00000549205	MIF4GD	A9UHW6	222 aa	Known RBP	12.76	□□□□□ -0.37
ERBB3-208	ENST00000549205	ENC1	O14682	589 aa		12.76	□□□□□ -0.37

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