RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 GDPD2Q9HCC8 539 aa18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 ZDHHC4Q9NPG8 344 aa18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 SCML2Q9UQR0 700 aa18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 INVSQ9Y283 1065 aa18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 CHD8Q9HCK8 2581 aa18.37■□□□□ 0.53
CHMP1A-205ENST00000548650 BCLAF3A2AJT9 711 aaKnown RBP18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 ADAM23O75077 832 aa18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 TULP3O75386 442 aa18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 TBX18O95935 607 aa18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 TRIM21P19474 475 aaKnown RBP18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 GBP1P32455 592 aa18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 TIE1P35590 1138 aa18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 ADAM9Q13443 819 aa18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 USP39Q53GS9 565 aaKnown RBP18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 EMC10Q5UCC4 262 aa18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 C11orf74Q86VG3 221 aa18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 TMEM25Q86YD3 366 aa18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 OLIG1Q8TAK6 271 aa18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 CYFIP2Q96F07 1278 aa18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 KLF16Q9BXK1 252 aaPredicted RBP18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 SPHK2Q9NRA0 654 aa18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 PCDHA5Q9Y5H7 936 aa18.36■□□□□ 0.53
CHMP1A-205ENST00000548650 TM4SF5O14894 197 aa18.35■□□□□ 0.53
CHMP1A-205ENST00000548650 ACO1P21399 889 aaKnown RBP18.35■□□□□ 0.53
CHMP1A-205ENST00000548650 GTF2H1P32780 548 aa18.35■□□□□ 0.53
CHMP1A-205ENST00000548650 TNFRSF4P43489 277 aa18.35■□□□□ 0.53
CHMP1A-205ENST00000548650 MXI1P50539 228 aa18.35■□□□□ 0.53
CHMP1A-205ENST00000548650 CREB5Q02930 508 aa18.35■□□□□ 0.53
CHMP1A-205ENST00000548650 STPG1Q5TH74 334 aa18.35■□□□□ 0.53
CHMP1A-205ENST00000548650 KRT39Q6A163 491 aa18.35■□□□□ 0.53
CHMP1A-205ENST00000548650 IL31Q6EBC2 164 aa18.35■□□□□ 0.53
CHMP1A-205ENST00000548650 HTR3DQ70Z44 454 aa18.35■□□□□ 0.53
CHMP1A-205ENST00000548650 NAT16Q8N8M0 369 aa18.35■□□□□ 0.53
CHMP1A-205ENST00000548650 TERB1Q8NA31 727 aa18.35■□□□□ 0.53
CHMP1A-205ENST00000548650 SEMA4DQ92854 862 aa18.35■□□□□ 0.53
CHMP1A-205ENST00000548650 EEF2KMTQ96G04 330 aa18.35■□□□□ 0.53
CHMP1A-205ENST00000548650 MAP1BP46821 2468 aaKnown RBP18.34■□□□□ 0.53
CHMP1A-205ENST00000548650 CACNA1BQ00975 2339 aa18.34■□□□□ 0.53
CHMP1A-205ENST00000548650 LAMA1P25391 3075 aa18.34■□□□□ 0.53
CHMP1A-205ENST00000548650 A0A1W2PQH9 124 aa18.34■□□□□ 0.53
CHMP1A-205ENST00000548650 ANO4Q32M45 955 aa18.34■□□□□ 0.53
CHMP1A-205ENST00000548650 EOGTQ5NDL2 527 aa18.34■□□□□ 0.53
CHMP1A-205ENST00000548650 BTBD8Q5XKL5 378 aa18.34■□□□□ 0.53
CHMP1A-205ENST00000548650 KLHDC10Q6PID8 442 aa18.34■□□□□ 0.53
CHMP1A-205ENST00000548650 TTC30AQ86WT1 665 aa18.34■□□□□ 0.53
CHMP1A-205ENST00000548650 CCDC150Q8NCX0 1101 aa18.34■□□□□ 0.53
CHMP1A-205ENST00000548650 DDX1Q92499 740 aaKnown RBP18.34■□□□□ 0.53
CHMP1A-205ENST00000548650 ARID3AQ99856 593 aa18.34■□□□□ 0.53
CHMP1A-205ENST00000548650 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.34■□□□□ 0.53
CHMP1A-205ENST00000548650 MARK1Q9P0L2 795 aa18.34■□□□□ 0.53
CHMP1A-205ENST00000548650 DEC1Q9P2X7 70 aa18.34■□□□□ 0.53
CHMP1A-205ENST00000548650 HCN2Q9UL51 889 aa18.34■□□□□ 0.53
CHMP1A-205ENST00000548650 CEP192Q8TEP8 1941 aa18.33■□□□□ 0.53
CHMP1A-205ENST00000548650 MDM4O15151 490 aa18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 TRIM24O15164 1050 aa18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 CACNG3O60359 315 aa18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 ALDH1A2O94788 518 aa18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 CAVIN2O95810 425 aa18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 ATP5C1P36542 298 aaKnown RBP18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 P2RY2P41231 377 aa18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 KIF11P52732 1056 aa18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 PNOCQ13519 176 aa18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 C10orf76Q5T2E6 689 aa18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 PPP1R26Q5T8A7 1209 aaPredicted RBP18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 CCDC186Q7Z3E2 898 aa18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 SCD5Q86SK9 330 aa18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 CNTNAP3BQ96NU0 1288 aa18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 EDEM2Q9BV94 578 aa18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 DUSP16Q9BY84 665 aa18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 CNTNAP3Q9BZ76 1288 aa18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 POLMQ9NP87 494 aaPredicted RBP18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 NUDT5Q9UKK9 219 aa18.33■□□□□ 0.52
CHMP1A-205ENST00000548650 KMT2BQ9UMN6 2715 aaPredicted RBP18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 TCRBV21S2A2A0A5A6 115 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 LNP1A1A4G5 178 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 TBC1D3BA6NDS4 549 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 NEDD8-MDP1E9PL57 170 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 RARGP13631 454 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 GOLGA8FQ08AF8 430 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 GOLGA8DPQ0D2H9 430 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 ZNF394Q53GI3 561 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 Q6ZNB5 142 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 MIB1Q86YT6 1006 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 FMR1NBQ8N0W7 255 aaPredicted RBP18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 ZNF513Q8N8E2 541 aaPredicted RBP18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 FBXL13Q8NEE6 735 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 KCNV2Q8TDN2 545 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 HMGB4Q8WW32 186 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 RLN3Q8WXF3 142 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 FAXDC2Q96IV6 333 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 CISHQ9NSE2 258 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 DNAJC17Q9NVM6 304 aaKnown RBP18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 LSM7Q9UK45 103 aaKnown RBP18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 USP3Q9Y6I4 520 aa18.32■□□□□ 0.52
CHMP1A-205ENST00000548650 EPB41P11171 864 aaKnown RBP18.31■□□□□ 0.52
CHMP1A-205ENST00000548650 TYRP14679 529 aa18.31■□□□□ 0.52
CHMP1A-205ENST00000548650 KCNA4P22459 653 aa18.31■□□□□ 0.52
CHMP1A-205ENST00000548650 MAP7D1Q3KQU3 841 aa18.31■□□□□ 0.52
CHMP1A-205ENST00000548650 PREPLQ4J6C6 727 aaPredicted RBP18.31■□□□□ 0.52
CHMP1A-205ENST00000548650 C10orf120Q5SQS8 335 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms