RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 SUGP1Q8IWZ8 645 aaKnown RBP4.76□□□□□ -1.65
PTCH1-216ENST00000548379 METTL25Q8N6Q8 603 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 PROKR1Q8TCW9 393 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 ATRIPQ8WXE1 791 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 LINC00476Q8WZB0 136 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 CTHRC1Q96CG8 243 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 GPR20Q99678 358 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 AIFM2Q9BRQ8 373 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 WDR11Q9BZH6 1224 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 PABPC3Q9H361 631 aaKnown RBP4.76□□□□□ -1.65
PTCH1-216ENST00000548379 MLXIPQ9HAP2 919 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 GLOD4Q9HC38 313 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 SRP68Q9UHB9 627 aaKnown RBP4.76□□□□□ -1.65
PTCH1-216ENST00000548379 USP22Q9UPT9 525 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 COL4A3Q01955 1670 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 EPRSP07814 1512 aaKnown RBP4.76□□□□□ -1.65
PTCH1-216ENST00000548379 GLI2P10070 1586 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 CD109Q6YHK3 1445 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 GXYLT2A0PJZ3 443 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 FAM90A18PA6NE21 464 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 FAM90A16PA6NEW6 464 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 FAM90A9PA6NNJ1 464 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 FAM90A5PA8MXJ8 464 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 J3KTA2 159 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 YY2O15391 372 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 SNX2O60749 519 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 ACTL6BO94805 426 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 ONECUT2O95948 504 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 FAM90A15PP0C7V4 464 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 FAM90A14PP0C7W9 464 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 ITGAMP11215 1152 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 CST5P28325 142 aaPredicted RBP4.75□□□□□ -1.65
PTCH1-216ENST00000548379 LIPAP38571 399 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 ALDH18A1P54886 795 aaKnown RBP4.75□□□□□ -1.65
PTCH1-216ENST00000548379 GRM4Q14833 912 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 TBCCQ15814 346 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 TXNRD1Q16881 649 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 NBPF8Q3BBV2 869 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 SULT6B1Q6IMI4 303 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 CYP26C1Q6V0L0 522 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 USP51Q70EK9 711 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 SPRED1Q7Z699 444 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 CAND1Q86VP6 1230 aaKnown RBP4.75□□□□□ -1.65
PTCH1-216ENST00000548379 NRSN1Q8IZ57 195 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 SUPT20HQ8NEM7 779 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 SPPL3Q8TCT6 385 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 SH3RF3Q8TEJ3 882 aaPredicted RBP4.75□□□□□ -1.65
PTCH1-216ENST00000548379 WDYHV1Q96HA8 205 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 PBKQ96KB5 322 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 Q96MF0 132 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 COQ10AQ96MF6 247 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 PAAF1Q9BRP4 392 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 PAGR1Q9BTK6 254 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 CASS4Q9NQ75 786 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 ITM2CQ9NQX7 267 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 DKK3Q9UBP4 350 aa4.75□□□□□ -1.65
PTCH1-216ENST00000548379 A8MVJ9 347 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 EXOC5O00471 708 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 FCHO1O14526 889 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 ZSCAN9O15535 394 aaPredicted RBP4.74□□□□□ -1.65
PTCH1-216ENST00000548379 DNPH1O43598 174 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 TAF5LO75529 589 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 USP1O94782 785 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 SRGAP2BP0DMP2 458 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 CDK7P50613 346 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 KRTAP10-2P60368 255 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 BIRC3Q13489 604 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 BMPR2Q13873 1038 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 EFR3AQ14156 821 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 CYP1B1Q16678 543 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 LSM12Q3MHD2 195 aaKnown RBP4.74□□□□□ -1.65
PTCH1-216ENST00000548379 TREML2Q5T2D2 321 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 FAM90A2PQ658T7 463 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 CLEC9AQ6UXN8 241 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 Q6ZNX1 250 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 RAB11FIP4Q86YS3 637 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 TOR1AIP2Q8NFQ8 470 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 SCAMP5Q8TAC9 235 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 GRAMD1AQ96CP6 724 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 RTKNQ9BST9 563 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 EHD3Q9NZN3 535 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 TESQ9UGI8 421 aaKnown RBP4.74□□□□□ -1.65
PTCH1-216ENST00000548379 STEAP1Q9UHE8 339 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 GJD2Q9UKL4 321 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 WDR7Q9Y4E6 1490 aa4.74□□□□□ -1.65
PTCH1-216ENST00000548379 KDM5BQ9UGL1 1544 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 PNMA6EA0A0J9YXQ4 647 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 KIAA0355O15063 1070 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 SPRY2O43597 315 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 WDR47O94967 919 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 LMNAP02545 664 aaKnown RBP4.73□□□□□ -1.65
PTCH1-216ENST00000548379 FESP07332 822 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 GYS1P13807 737 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 CD19P15391 556 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 PAX3P23760 479 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 KLRK1P26718 216 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 ITPKBP27987 946 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 GKP32189 559 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms