RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 FGAP02671 866 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 CREB1P16220 341 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 ABCB4P21439 1286 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 SERPINB3P29508 390 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 PPM1AP35813 382 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 TECP42680 631 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 RHBDL3P58872 404 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 HOXA4Q00056 320 aaPredicted RBP4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 NHLH1Q02575 133 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 GPS1Q13098 491 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 ATP1A4Q13733 1029 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 CCDC142Q17RM4 750 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 C4orf46Q504U0 113 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 L1TD1Q5T7N2 865 aaKnown RBP4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 ABLIM2Q6H8Q1 611 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 CLEC9AQ6UXN8 241 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 SYTL1Q8IYJ3 562 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 SUN3Q8TAQ9 357 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 PRDM13Q9H4Q3 707 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 TFCP2L1Q9NZI6 479 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 MGAT4CQ9UBM8 478 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 ADAM21Q9UKJ8 722 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 PCDHGB2Q9Y5G2 931 aa4.91□□□□□ -1.62
DEPDC4-205ENST00000548313 ABHD14A-ACY1A0A1B0GW23 586 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 H7C1Q1 480 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 PODXLO00592 558 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 SPRY2O43597 315 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 ARP10275 920 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 MST1P26927 711 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 NTSR1P30989 418 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 PTH2RP49190 550 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 EIF4A1P60842 406 aaKnown RBP4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 NSUN2Q08J23 767 aaKnown RBP eCLIP4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 GRM1Q13255 1194 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 ACOX1Q15067 660 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 RAP1GAP2Q684P5 730 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 SUMO4Q6EEV6 95 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 XRRA1Q6P2D8 792 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 TLDC1Q6P9B6 456 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 DPY19L3Q6ZPD9 716 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 RD3Q7Z3Z2 195 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 FSTL5Q8N475 847 aaPredicted RBP4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 METTL25Q8N6Q8 603 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 C11orf44Q8N8P7 122 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 SNX18Q96RF0 628 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 MPHOSPH6Q99547 160 aaKnown RBP4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 NUDT22Q9BRQ3 303 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 TTLL2Q9BWV7 592 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 AS3MTQ9HBK9 375 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 TMEM8AQ9HCN3 771 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 RXFP3Q9NSD7 469 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 LRCH1Q9Y2L9 728 aa4.9□□□□□ -1.63
DEPDC4-205ENST00000548313 GLP2RO95838 553 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 VIPP01282 170 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 TMEM225BP0DP42 221 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 HTR7P34969 479 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 DGKQP52824 942 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 CYP4F2P78329 520 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 BIRC2Q13490 618 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 FHL3Q13643 280 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 RAB30Q15771 203 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 PGBD2Q6P3X8 592 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 TRIM72Q6ZMU5 477 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 SPICE1Q8N0Z3 855 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 PNPLA1Q8N8W4 532 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 TERB1Q8NA31 727 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 REPS1Q96D71 796 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 DAZAP1Q96EP5 407 aaKnown RBP4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 WDYHV1Q96HA8 205 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 WDR24Q96S15 920 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 R3HDMLQ9H3Y0 253 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 PLCB1Q9NQ66 1216 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 GAR1Q9NY12 217 aaKnown RBP4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 SLC39A10Q9ULF5 831 aa4.89□□□□□ -1.63
DEPDC4-205ENST00000548313 FNDC1Q4ZHG4 1894 aaPredicted RBP4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 GOLGA6L3A6NEY3 463 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 LRRC3CA6NJW4 275 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 ZSCAN9O15535 394 aaPredicted RBP4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 FFAR2O15552 330 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 WDR47O94967 919 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 C1RP00736 705 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 ADRA1DP25100 572 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 PSG6Q00889 435 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 MTAPQ13126 283 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 STARD3Q14849 445 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 RNASE12Q5GAN4 147 aaKnown RBP4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 FCRLBQ6BAA4 426 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 NAPRTQ6XQN6 538 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 PTF1AQ7RTS3 328 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 AMIGO2Q86SJ2 522 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 OVCA2Q8WZ82 227 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 GRAMD1AQ96CP6 724 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 RPS6KC1Q96S38 1066 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 CIPCQ9C0C6 399 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 WDR12Q9GZL7 423 aaKnown RBP4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 HELLSQ9NRZ9 838 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 SH3BP4Q9P0V3 963 aa4.88□□□□□ -1.63
DEPDC4-205ENST00000548313 DTNAQ9Y4J8 743 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms