RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 KIF11P52732 1056 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 CBWD6Q4V339 395 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 CBWD3Q5JTY5 395 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 CBWD5Q5RIA9 395 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 ZNF658Q5TYW1 1059 aaPredicted RBP14.08□□□□□ -0.16
CPSF6-204ENST00000547486 ANO7Q6IWH7 933 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 SCD5Q86SK9 330 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 SLC4A11Q8NBS3 891 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 TXNDC5Q8NBS9 432 aaKnown RBP14.08□□□□□ -0.16
CPSF6-204ENST00000547486 MDGA1Q8NFP4 955 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 DUSP16Q9BY84 665 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 CISHQ9NSE2 258 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 PCDHA5Q9Y5H7 936 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 SDK1Q7Z5N4 2213 aa14.08□□□□□ -0.16
CPSF6-204ENST00000547486 HELZP42694 1942 aaKnown RBP14.07□□□□□ -0.16
CPSF6-204ENST00000547486 RARGP13631 454 aa14.07□□□□□ -0.16
CPSF6-204ENST00000547486 RAD23BP54727 409 aa14.07□□□□□ -0.16
CPSF6-204ENST00000547486 ANO4Q32M45 955 aa14.07□□□□□ -0.16
CPSF6-204ENST00000547486 TCEAL6Q6IPX3 200 aa14.07□□□□□ -0.16
CPSF6-204ENST00000547486 TTC30AQ86WT1 665 aa14.07□□□□□ -0.16
CPSF6-204ENST00000547486 FRMD1Q8N878 549 aa14.07□□□□□ -0.16
CPSF6-204ENST00000547486 FBXL13Q8NEE6 735 aa14.07□□□□□ -0.16
CPSF6-204ENST00000547486 SPATA20Q8TB22 786 aa14.07□□□□□ -0.16
CPSF6-204ENST00000547486 TCEAL3Q969E4 200 aa14.07□□□□□ -0.16
CPSF6-204ENST00000547486 P2RY11Q96G91 374 aa14.07□□□□□ -0.16
CPSF6-204ENST00000547486 CNOT6LQ96LI5 555 aaKnown RBP14.07□□□□□ -0.16
CPSF6-204ENST00000547486 PNPLA8Q9NP80 782 aa14.07□□□□□ -0.16
CPSF6-204ENST00000547486 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.07□□□□□ -0.16
CPSF6-204ENST00000547486 USP3Q9Y6I4 520 aa14.07□□□□□ -0.16
CPSF6-204ENST00000547486 TRIM49BA6NDI0 452 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 TBC1D3BA6NDS4 549 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 TM4SF5O14894 197 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 EPB41P11171 864 aaKnown RBP14.06□□□□□ -0.16
CPSF6-204ENST00000547486 BCKDHBP21953 392 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 GBP1P32455 592 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 MPLP40238 635 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 MXI1P50539 228 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 AASDHQ4L235 1098 aaPredicted RBP14.06□□□□□ -0.16
CPSF6-204ENST00000547486 USP39Q53GS9 565 aaKnown RBP14.06□□□□□ -0.16
CPSF6-204ENST00000547486 COBLL1Q53SF7 1204 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 BTBD8Q5XKL5 378 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 CCDC186Q7Z3E2 898 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 MIB1Q86YT6 1006 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 ZC3H3Q8IXZ2 948 aaKnown RBP14.06□□□□□ -0.16
CPSF6-204ENST00000547486 CCDC150Q8NCX0 1101 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 OLIG1Q8TAK6 271 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 RLN3Q8WXF3 142 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 TMEM176AQ96HP8 235 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 GSDMAQ96QA5 445 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 RMND1Q9NWS8 449 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 DEC1Q9P2X7 70 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 NAGPAQ9UK23 515 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 PCDHGA5Q9Y5G8 931 aa14.06□□□□□ -0.16
CPSF6-204ENST00000547486 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.05□□□□□ -0.16
CPSF6-204ENST00000547486 FOXD2O60548 495 aaPredicted RBP14.05□□□□□ -0.16
CPSF6-204ENST00000547486 RHOBTB1O94844 696 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 KLKB1P03952 638 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 TRIM21P19474 475 aaKnown RBP14.05□□□□□ -0.16
CPSF6-204ENST00000547486 PLA2G4AP47712 749 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 CREB5Q02930 508 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 ELF2Q15723 593 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 HSF5Q4G112 596 aaPredicted RBP14.05□□□□□ -0.16
CPSF6-204ENST00000547486 DCAF17Q5H9S7 520 aaPredicted RBP14.05□□□□□ -0.16
CPSF6-204ENST00000547486 PPM1JQ5JR12 505 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 C10orf120Q5SQS8 335 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 ISM2Q6H9L7 571 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 KLHDC10Q6PID8 442 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 Q6ZNB5 142 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 TPGS1Q6ZTW0 290 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 C12orf50Q8NA57 414 aaPredicted RBP14.05□□□□□ -0.16
CPSF6-204ENST00000547486 CCDC34Q96HJ3 373 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 FAXDC2Q96IV6 333 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 VPS45Q9NRW7 570 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 DNMT3LQ9UJW3 386 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 COQ4Q9Y3A0 265 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 NCOR2Q9Y618 2525 aa14.05□□□□□ -0.16
CPSF6-204ENST00000547486 MYO16Q9Y6X6 1858 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 EML5Q05BV3 1969 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 MYOFQ9NZM1 2061 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 BCLAF3A2AJT9 711 aaKnown RBP14.04□□□□□ -0.16
CPSF6-204ENST00000547486 GOLGA6L4A6NEF3 574 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 NEDD8-MDP1E9PL57 170 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 TULP2O00295 520 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 STX10O60499 249 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 CAVIN2O95810 425 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 TYRP14679 529 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 CD44P16070 742 aaKnown RBP14.04□□□□□ -0.16
CPSF6-204ENST00000547486 LIMK1P53667 647 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 FKBP3Q00688 224 aaKnown RBP14.04□□□□□ -0.16
CPSF6-204ENST00000547486 RAB41Q5JT25 222 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 EOGTQ5NDL2 527 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 C10orf76Q5T2E6 689 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 TCERG1LQ5VWI1 586 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 PMS2CLQ68D20 193 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 ARHGAP17Q68EM7 881 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 TOGARAM2Q6ZUX3 1019 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 PIGZQ86VD9 579 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 ZNF276Q8N554 614 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 TERB1Q8NA31 727 aa14.04□□□□□ -0.16
CPSF6-204ENST00000547486 NDRG1Q92597 394 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms