RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 PHTF2Q8N3S3 785 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 ZNF276Q8N554 614 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 CCDC33Q8N5R6 958 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 C12orf50Q8NA57 414 aaPredicted RBP15.17■□□□□ 0.02
COL2A1-209ENST00000546974 FBXL13Q8NEE6 735 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 SEMA4DQ92854 862 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 WBP2Q969T9 261 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 CNOT6LQ96LI5 555 aaKnown RBP15.17■□□□□ 0.02
COL2A1-209ENST00000546974 GSDMAQ96QA5 445 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 DUSP16Q9BY84 665 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 FAM124BQ9H5Z6 455 aaPredicted RBP15.17■□□□□ 0.02
COL2A1-209ENST00000546974 OSER1Q9NX31 292 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 RAB20Q9NX57 234 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 DCLK1O15075 740 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 CYP26A1O43174 497 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 GREM1O60565 184 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 ALDH1A2O94788 518 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 SMC2O95347 1197 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 RARGP13631 454 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 KIR2DL1P43626 348 aaPredicted RBP15.16■□□□□ 0.02
COL2A1-209ENST00000546974 PSEN1P49768 467 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 NUCB2P80303 420 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 KDSRQ06136 332 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 GOLGA8FQ08AF8 430 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 GOLGA8DPQ0D2H9 430 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 SF3A2Q15428 464 aaKnown RBP15.16■□□□□ 0.02
COL2A1-209ENST00000546974 AASDHQ4L235 1098 aaPredicted RBP15.16■□□□□ 0.02
COL2A1-209ENST00000546974 EOGTQ5NDL2 527 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 TMEM92Q6UXU6 159 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 NUDT18Q6ZVK8 323 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 TMEM25Q86YD3 366 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 ZC3H3Q8IXZ2 948 aaKnown RBP15.16■□□□□ 0.02
COL2A1-209ENST00000546974 ALLCQ8N6M5 410 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 NAT16Q8N8M0 369 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 IL17RCQ8NAC3 791 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 TXNDC5Q8NBS9 432 aaKnown RBP15.16■□□□□ 0.02
COL2A1-209ENST00000546974 ENGASEQ8NFI3 743 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 SPATA20Q8TB22 786 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 KCNV2Q8TDN2 545 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 JAKMIP2Q96AA8 810 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 EEF2KMTQ96G04 330 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 HEXIM2Q96MH2 286 aaKnown RBP15.16■□□□□ 0.02
COL2A1-209ENST00000546974 TSG101Q99816 390 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 GTPBP4Q9BZE4 634 aaKnown RBP15.16■□□□□ 0.02
COL2A1-209ENST00000546974 NMUR1Q9HB89 426 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 CISHQ9NSE2 258 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL2A1-209ENST00000546974 DEC1Q9P2X7 70 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 LSM7Q9UK45 103 aaKnown RBP15.16■□□□□ 0.02
COL2A1-209ENST00000546974 USP3Q9Y6I4 520 aa15.16■□□□□ 0.02
COL2A1-209ENST00000546974 A0A1W2PQH9 124 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 TBC1D3BA6NDS4 549 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 SLC16A3O15427 465 aaKnown RBP15.15■□□□□ 0.02
COL2A1-209ENST00000546974 TULP3O75386 442 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 KLF8O95600 359 aaPredicted RBP15.15■□□□□ 0.02
COL2A1-209ENST00000546974 MPLP40238 635 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 PLA2G4AP47712 749 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 FKBP3Q00688 224 aaKnown RBP15.15■□□□□ 0.02
COL2A1-209ENST00000546974 CCDC6Q16204 474 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 ANO4Q32M45 955 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 ZNF394Q53GI3 561 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 EMC10Q5UCC4 262 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 ANO7Q6IWH7 933 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 CCDC186Q7Z3E2 898 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 TADA2BQ86TJ2 420 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 SLC4A11Q8NBS3 891 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 MDGA1Q8NFP4 955 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 TMEM176AQ96HP8 235 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 TIGD1Q96MW7 591 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 TPSD1Q9BZJ3 242 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 UBXN6Q9BZV1 441 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 POLMQ9NP87 494 aaPredicted RBP15.15■□□□□ 0.02
COL2A1-209ENST00000546974 VPS45Q9NRW7 570 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 DNMT3LQ9UJW3 386 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 PLXND1Q9Y4D7 1925 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 GON4LQ3T8J9 2241 aa15.15■□□□□ 0.02
COL2A1-209ENST00000546974 SGK1O00141 431 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 RALAP11233 206 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 HNRNPLP14866 589 aaKnown RBP eCLIP15.14■□□□□ 0.01
COL2A1-209ENST00000546974 GBP1P32455 592 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 RAD23BP54727 409 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 PMS2CLQ68D20 193 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 ARHGAP17Q68EM7 881 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 ANKRD40Q6AI12 368 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 TRMT11Q7Z4G4 463 aaKnown RBP15.14■□□□□ 0.01
COL2A1-209ENST00000546974 TERB1Q8NA31 727 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 OLIG1Q8TAK6 271 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 DDX1Q92499 740 aaKnown RBP15.14■□□□□ 0.01
COL2A1-209ENST00000546974 TATDN2Q93075 761 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 SMARCE1Q969G3 411 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 XPO6Q96QU8 1125 aaKnown RBP15.14■□□□□ 0.01
COL2A1-209ENST00000546974 CDK5RAP1Q96SZ6 601 aaKnown RBP15.14■□□□□ 0.01
COL2A1-209ENST00000546974 CLIC5Q9NZA1 410 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 MARK1Q9P0L2 795 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 WDR35Q9P2L0 1181 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 HOOK1Q9UJC3 728 aaKnown RBP15.14■□□□□ 0.01
COL2A1-209ENST00000546974 NAGPAQ9UK23 515 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 COQ4Q9Y3A0 265 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 STARD13Q9Y3M8 1113 aa15.14■□□□□ 0.01
COL2A1-209ENST00000546974 TPRP12270 2363 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms