RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CCDC183Q5T5S1 534 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 FSTL4Q6MZW2 842 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 SASS6Q6UVJ0 657 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 HTR3DQ70Z44 454 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 ADGRG2Q8IZP9 1017 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 SCML4Q8N228 414 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 UBA3Q8TBC4 463 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 ENOX1Q8TC92 643 aaKnown RBP16.7■□□□□ 0.26
DDX54-204ENST00000546898 TUBGCP2Q9BSJ2 902 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 ULBP1Q9BZM6 244 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 NDST4Q9H3R1 872 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 SEMA4AQ9H3S1 761 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 MYO15AQ9UKN7 3530 aa16.7■□□□□ 0.26
DDX54-204ENST00000546898 ZFHX2Q9C0A1 2572 aaPredicted RBP16.69■□□□□ 0.26
DDX54-204ENST00000546898 DMDP11532 3685 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 KCNJ18B7U540 433 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 M0QYV0 167 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 TBX18O95935 607 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 IRF1P10914 325 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 KRT5P13647 590 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 PON1P27169 355 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 CXCL12P48061 93 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 GALK1P51570 392 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 YWHAGP61981 247 aaKnown RBP eCLIP16.69■□□□□ 0.26
DDX54-204ENST00000546898 ADIGQ0VDE8 80 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 KCNJ12Q14500 433 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 DHCR24Q15392 516 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 VWA3BQ502W6 1294 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 Q6ZS52 159 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 SIX6OS1Q8N1H7 587 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 CCDC26Q8TAB7 109 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 NELL1Q92832 810 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 ZSWIM1Q9BR11 485 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 CNGB3Q9NQW8 809 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 ANO10Q9NW15 660 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 NFE2L3Q9Y4A8 694 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 PCDHGA2Q9Y5H1 932 aa16.69■□□□□ 0.26
DDX54-204ENST00000546898 MED7O43513 233 aa16.68■□□□□ 0.26
DDX54-204ENST00000546898 EGFP01133 1207 aa16.68■□□□□ 0.26
DDX54-204ENST00000546898 ADH5P11766 374 aa16.68■□□□□ 0.26
DDX54-204ENST00000546898 OPRD1P41143 372 aa16.68■□□□□ 0.26
DDX54-204ENST00000546898 NRLP54845 237 aa16.68■□□□□ 0.26
DDX54-204ENST00000546898 STX1AQ16623 288 aa16.68■□□□□ 0.26
DDX54-204ENST00000546898 GAB4Q2WGN9 574 aa16.68■□□□□ 0.26
DDX54-204ENST00000546898 MIIPQ5JXC2 388 aa16.68■□□□□ 0.26
DDX54-204ENST00000546898 RHBDF2Q6PJF5 856 aa16.68■□□□□ 0.26
DDX54-204ENST00000546898 BBS7Q8IWZ6 715 aa16.68■□□□□ 0.26
DDX54-204ENST00000546898 SLC35F5Q8WV83 523 aa16.68■□□□□ 0.26
DDX54-204ENST00000546898 SHC3Q92529 594 aa16.68■□□□□ 0.26
DDX54-204ENST00000546898 SECISBP2LQ93073 1101 aaKnown RBP16.68■□□□□ 0.26
DDX54-204ENST00000546898 NKD2Q969F2 451 aaPredicted RBP16.68■□□□□ 0.26
DDX54-204ENST00000546898 HSFY1Q96LI6 401 aa16.68■□□□□ 0.26
DDX54-204ENST00000546898 SAMSN1Q9NSI8 373 aaKnown RBP16.68■□□□□ 0.26
DDX54-204ENST00000546898 OLA1Q9NTK5 396 aaKnown RBP16.68■□□□□ 0.26
DDX54-204ENST00000546898 ZSCAN32Q9NX65 697 aa16.68■□□□□ 0.26
DDX54-204ENST00000546898 RIF1Q5UIP0 2472 aaKnown RBP16.68■□□□□ 0.26
DDX54-204ENST00000546898 FAM186AA6NE01 2351 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.67■□□□□ 0.26
DDX54-204ENST00000546898 CHURC1-FNTBB4DL54 471 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 SCAMP3O14828 347 aaKnown RBP16.67■□□□□ 0.26
DDX54-204ENST00000546898 MDM4O15151 490 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 GREM1O60565 184 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 ATG13O75143 517 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 TDGF1P13385 188 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 GNA15P30679 374 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 DAOAP59103 153 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 COG7P83436 770 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 SATB1Q01826 763 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 GAD2Q05329 585 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 HSP90AA4PQ58FG1 418 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 TCP11X2Q5H9J9 407 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 BTBD8Q5XKL5 378 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 GJB7Q6PEY0 223 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 RSRC2Q7L4I2 434 aaKnown RBP16.67■□□□□ 0.26
DDX54-204ENST00000546898 BHLHA9Q7RTU4 235 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 ZBTB44Q8NCP5 570 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 IRGQQ8WZA9 623 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 WBP2Q969T9 261 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 FBRSL1Q9HCM7 1045 aaKnown RBP16.67■□□□□ 0.26
DDX54-204ENST00000546898 SIX2Q9NPC8 291 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 RASAL2Q9UJF2 1139 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 NUDT5Q9UKK9 219 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 STRIP2Q9ULQ0 834 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 ZNF510Q9Y2H8 683 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 R4GN57 208 aa16.67■□□□□ 0.26
DDX54-204ENST00000546898 PRR23AA6NEV1 266 aa16.66■□□□□ 0.26
DDX54-204ENST00000546898 HOXC11O43248 304 aaPredicted RBP16.66■□□□□ 0.26
DDX54-204ENST00000546898 GFRA3O60609 400 aa16.66■□□□□ 0.26
DDX54-204ENST00000546898 RNF40O75150 1001 aa16.66■□□□□ 0.26
DDX54-204ENST00000546898 FBXO21O94952 628 aa16.66■□□□□ 0.26
DDX54-204ENST00000546898 EFEMP1Q12805 493 aa16.66■□□□□ 0.26
DDX54-204ENST00000546898 ARHGAP44Q17R89 818 aa16.66■□□□□ 0.26
DDX54-204ENST00000546898 LY6G5CQ5SRR4 150 aa16.66■□□□□ 0.26
DDX54-204ENST00000546898 CDKAL1Q5VV42 579 aa16.66■□□□□ 0.26
DDX54-204ENST00000546898 NAIF1Q69YI7 327 aaPredicted RBP16.66■□□□□ 0.26
DDX54-204ENST00000546898 PMF1Q6P1K2 205 aa16.66■□□□□ 0.26
DDX54-204ENST00000546898 MIB1Q86YT6 1006 aa16.66■□□□□ 0.26
DDX54-204ENST00000546898 DCLK3Q9C098 648 aa16.66■□□□□ 0.26
DDX54-204ENST00000546898 SPHK2Q9NRA0 654 aa16.66■□□□□ 0.26
DDX54-204ENST00000546898 ABCC13Q9NSE7 274 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms