RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 STILQ15468 1287 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 TRIP13Q15645 432 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 KYAT1Q16773 422 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 MUM1Q2TAK8 710 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 TAF1BQ53T94 588 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 UBAP2Q5T6F2 1119 aaKnown RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 TTC39BQ5VTQ0 682 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 PLA2G4FQ68DD2 849 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 ZNF449Q6P9G9 518 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 TMEM270Q6UE05 265 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 MFSD7Q6UXD7 560 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 ABHD15Q6UXT9 468 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 KYAT3Q6YP21 454 aaKnown RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 C3orf62Q6ZUJ4 267 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 MAEAQ7L5Y9 396 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 NET1Q7Z628 596 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 PHLDB2Q86SQ0 1253 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 VPS52Q8N1B4 723 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 SLC4A11Q8NBS3 891 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 MCUQ8NE86 351 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 DEPTORQ8TB45 409 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 ACMSDQ8TDX5 336 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 MZB1Q8WU39 189 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 DCAKDQ8WVC6 231 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 ZNF606Q8WXB4 792 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 STON2Q8WXE9 905 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 MCUR1Q96AQ8 359 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 SKA1Q96BD8 255 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 HAUS1Q96CS2 278 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 RTP4Q96DX8 246 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 KLRG1Q96E93 195 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 DTNBP1Q96EV8 351 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 ZNF333Q96JL9 665 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 FAM167AQ96KS9 214 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 SUSD3Q96L08 255 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 PRMT6Q96LA8 375 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 PAFAH2Q99487 392 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 HERPUD2Q9BSE4 406 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 HEMGNQ9BXL5 484 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 GCOM2Q9BZD3 368 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 IQCGQ9H095 443 aaKnown RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 WWP1Q9H0M0 922 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 POLR3FQ9H1D9 316 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 C2orf40Q9H1Z8 148 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 DENND2DQ9H6A0 471 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 DHX33Q9H6R0 707 aaKnown RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 JPH1Q9HDC5 661 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 DDX43Q9NXZ2 648 aaKnown RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 RBAKQ9NYW8 714 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-225ENST00000545920 NDUFA13Q9P0J0 144 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 COL20A1Q9P218 1284 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 PAK5Q9P286 719 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 SLC9A2Q9UBY0 812 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 HAO1Q9UJM8 370 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 KIAA1257Q9ULG3 409 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 ZNRF3Q9ULT6 936 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 AGTPBP1Q9UPW5 1226 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 ASB3Q9Y575 518 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 ADGRA2Q96PE1 1338 aa6.74□□□□□ -1.33
SNHG1-225ENST00000545920 CNTNAP1P78357 1384 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ANKRD31Q8N7Z5 1873 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 C3orf70A6NLC5 250 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-225ENST00000545920 K7ERI5 159 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 NFIBO00712 420 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 LPXNO60711 386 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 SPAG7O75391 227 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 TNFRSF21O75509 655 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 KRT38O76015 456 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 IL18RAPO95256 599 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 VNN1O95497 513 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ERBB2P04626 1255 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 SNRPAP09012 282 aaKnown RBP6.73□□□□□ -1.33
SNHG1-225ENST00000545920 SUPT20HL2P0C7V6 817 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ESRRAP11474 423 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-225ENST00000545920 KCNA2P16389 499 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ATF7P17544 494 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-225ENST00000545920 CD58P19256 250 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ATP4AP20648 1035 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 KDELR1P24390 212 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ARL2P36404 184 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 CCNFP41002 786 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ETV4P43268 484 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 SSR1P43307 286 aaKnown RBP6.73□□□□□ -1.33
SNHG1-225ENST00000545920 GABRB2P47870 512 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 GCLCP48506 637 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-225ENST00000545920 VPS41P49754 854 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 GPX6P59796 221 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 MYL6P60660 151 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 RPS6P62753 249 aaKnown RBP6.73□□□□□ -1.33
SNHG1-225ENST00000545920 AP2B1P63010 937 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 UBXN2AP68543 259 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 PRKCEQ02156 737 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 WASHC5Q12768 1159 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 SPP2Q13103 211 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 EMC2Q15006 297 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 PDK2Q15119 407 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 SLC1A5Q15758 541 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 MAPK6Q16659 721 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 UGCGQ16739 394 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 DUOXA2Q1HG44 320 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms