RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 USP6NLQ92738 828 aa9.09□□□□□ -0.95
TDP1-204ENST00000545686 ATG4CQ96DT6 458 aa9.09□□□□□ -0.95
TDP1-204ENST00000545686 OLFM3Q96PB7 478 aa9.09□□□□□ -0.95
TDP1-204ENST00000545686 CPXM1Q96SM3 734 aa9.09□□□□□ -0.95
TDP1-204ENST00000545686 BCO2Q9BYV7 579 aa9.09□□□□□ -0.95
TDP1-204ENST00000545686 FAM96AQ9H5X1 160 aa9.09□□□□□ -0.95
TDP1-204ENST00000545686 RAB6BQ9NRW1 208 aa9.09□□□□□ -0.95
TDP1-204ENST00000545686 THAP1Q9NVV9 213 aa9.09□□□□□ -0.95
TDP1-204ENST00000545686 CYTH4Q9UIA0 394 aa9.09□□□□□ -0.95
TDP1-204ENST00000545686 TELO2Q9Y4R8 837 aa9.09□□□□□ -0.95
TDP1-204ENST00000545686 RIPK3Q9Y572 518 aa9.09□□□□□ -0.95
TDP1-204ENST00000545686 IGKV6D-21A0A0A0MT36 114 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 SDR42E2A6NKP2 422 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 MSCO60682 206 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 TNNC2P02585 160 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 ERBB2P04626 1255 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 HARSP12081 509 aaKnown RBP9.08□□□□□ -0.96
TDP1-204ENST00000545686 CD19P15391 556 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 MAGEA3P43357 314 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 CDK7P50613 346 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 CDC16Q13042 620 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 BIRC2Q13490 618 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 TARBP2Q15633 366 aaKnown RBP9.08□□□□□ -0.96
TDP1-204ENST00000545686 PDCD2Q16342 344 aaPredicted RBP9.08□□□□□ -0.96
TDP1-204ENST00000545686 TAB3Q8N5C8 712 aaPredicted RBP9.08□□□□□ -0.96
TDP1-204ENST00000545686 CENPKQ9BS16 269 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 CNPY3Q9BT09 278 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 THTPAQ9BU02 230 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 MECRQ9BV79 373 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 USP29Q9HBJ7 922 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 DMAP1Q9NPF5 467 aaPredicted RBP9.08□□□□□ -0.96
TDP1-204ENST00000545686 PCSK1NQ9UHG2 260 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 CPSF3Q9UKF6 684 aaKnown RBP9.08□□□□□ -0.96
TDP1-204ENST00000545686 SSX2IPQ9Y2D8 614 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 BCLAF3A2AJT9 711 aaKnown RBP9.08□□□□□ -0.96
TDP1-204ENST00000545686 FAM159BA6NKW6 160 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 ZNF487B1APH4 448 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 H7C0C1 242 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 B4GALT4O60513 344 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 CCNT2O60583 730 aaKnown RBP9.08□□□□□ -0.96
TDP1-204ENST00000545686 RAD17O75943 681 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 KLHL2O95198 593 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 HOXC6P09630 235 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 MYL4P12829 197 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 CHRNA5P30532 468 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 CPOXP36551 454 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 ATP5OP48047 213 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 CDH6P55285 790 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 KDSRQ06136 332 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 MTM1Q13496 603 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 MTMR2Q13614 643 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 HIC1Q14526 733 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 PDK2Q15119 407 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 SEZ6Q53EL9 994 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 MEX3CQ5U5Q3 659 aaKnown RBP9.08□□□□□ -0.96
TDP1-204ENST00000545686 SCARA3Q6AZY7 606 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 SNRNP48Q6IEG0 339 aaKnown RBP9.08□□□□□ -0.96
TDP1-204ENST00000545686 SCARA5Q6ZMJ2 495 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 WDR75Q8IWA0 830 aaKnown RBP9.08□□□□□ -0.96
TDP1-204ENST00000545686 MAP7D3Q8IWC1 876 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 EMC1Q8N766 993 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 FBXO27Q8NI29 283 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 GSDMBQ8TAX9 411 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.08□□□□□ -0.96
TDP1-204ENST00000545686 ACMSDQ8TDX5 336 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 DTNBP1Q96EV8 351 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 ANKRD36BP1Q96IX9 119 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 MIS12Q9H081 205 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 TJP2Q9UDY2 1190 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 TBC1D30Q9Y2I9 924 aa9.08□□□□□ -0.96
TDP1-204ENST00000545686 CITO14578 2027 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 DCAF8L1A6NGE4 600 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 SLC15A5A6NIM6 579 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 CXorf49A8MYA2 514 aaPredicted RBP9.07□□□□□ -0.96
TDP1-204ENST00000545686 BUD23O43709 281 aaKnown RBP9.07□□□□□ -0.96
TDP1-204ENST00000545686 TOMM70O94826 608 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 TPSB2P20231 275 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 GPD1P21695 349 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 STX3Q13277 289 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 CUL3Q13618 768 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 TPSAB1Q15661 275 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 EFHC1Q5JVL4 640 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 CES4AQ5XG92 561 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 CYP4V2Q6ZWL3 525 aaPredicted RBP9.07□□□□□ -0.96
TDP1-204ENST00000545686 CYS1Q717R9 158 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 KRT27Q7Z3Y8 459 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 DHDDSQ86SQ9 333 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 CAND1Q86VP6 1230 aaKnown RBP9.07□□□□□ -0.96
TDP1-204ENST00000545686 ST13P4Q8IZP2 240 aaPredicted RBP9.07□□□□□ -0.96
TDP1-204ENST00000545686 FAM172AQ8WUF8 416 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 RNF157Q96PX1 679 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 PEBP4Q96S96 227 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 ACO2Q99798 780 aaKnown RBP9.07□□□□□ -0.96
TDP1-204ENST00000545686 ADPGKQ9BRR6 497 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 PLAC1Q9HBJ0 212 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 XAB2Q9HCS7 855 aaKnown RBP9.07□□□□□ -0.96
TDP1-204ENST00000545686 S100A14Q9HCY8 104 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 VCX3AQ9NNX9 186 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.07□□□□□ -0.96
TDP1-204ENST00000545686 ETNK2Q9NVF9 386 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms