RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 C1SP09871 688 aa16.4■□□□□ 0.22
CLSTN3-216ENST00000545663 GP1BBP13224 206 aa16.4■□□□□ 0.22
CLSTN3-216ENST00000545663 GLDCP23378 1020 aa16.4■□□□□ 0.22
CLSTN3-216ENST00000545663 OXTRP30559 389 aa16.4■□□□□ 0.22
CLSTN3-216ENST00000545663 CTSKP43235 329 aa16.4■□□□□ 0.22
CLSTN3-216ENST00000545663 VAC14Q08AM6 782 aa16.4■□□□□ 0.22
CLSTN3-216ENST00000545663 TAF10Q12962 218 aa16.4■□□□□ 0.22
CLSTN3-216ENST00000545663 TEAD4Q15561 434 aa16.4■□□□□ 0.22
CLSTN3-216ENST00000545663 TMPRSS6Q8IU80 811 aa16.4■□□□□ 0.22
CLSTN3-216ENST00000545663 FAM84AQ96KN4 292 aa16.4■□□□□ 0.22
CLSTN3-216ENST00000545663 NUP58Q9BVL2 599 aa16.4■□□□□ 0.22
CLSTN3-216ENST00000545663 TTLL2Q9BWV7 592 aa16.4■□□□□ 0.22
CLSTN3-216ENST00000545663 FAM117AQ9C073 453 aa16.4■□□□□ 0.22
CLSTN3-216ENST00000545663 BSNQ9UPA5 3926 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 TISP43B9A030 160 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 NEDD8-MDP1E9PL57 170 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 COCHO43405 550 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 GUCY2CP25092 1073 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 UCNP55089 124 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 PCBP4P57723 403 aaKnown RBP16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 PSMC1P62191 440 aaKnown RBP16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 MYL7Q01449 175 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 INAVAQ3KP66 663 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 C6orf132Q5T0Z8 1188 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 FAM171BQ6P995 826 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 DDX42Q86XP3 938 aaKnown RBP eCLIP16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 EID2Q8N6I1 236 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 EXD3Q8N9H8 876 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 SNX29Q8TEQ0 813 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 OTUB2Q96DC9 234 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 SIPA1Q96FS4 1042 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 FUBP3Q96I24 572 aaKnown RBP eCLIP16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 KCNK4Q9NYG8 393 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 MAGEC2Q9UBF1 373 aaPredicted RBP16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 C2CD2Q9Y426 696 aa16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 HEMK1Q9Y5R4 338 aaPredicted RBP16.39■□□□□ 0.21
CLSTN3-216ENST00000545663 A0A1B0GTQ1 180 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 TULP1O00294 542 aaPredicted RBP16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 GFRA2O00451 464 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 HUS1O60921 280 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 IGLV3-19P01714 112 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 CISD3P0C7P0 127 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 IRF1P10914 325 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 MYF5P13349 255 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 TYRP14679 529 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 LMO2P25791 158 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 ACSL1P33121 698 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 GRIA4P48058 902 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 IFRD2Q12894 506 aaPredicted RBP16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 NUMA1Q14980 2115 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 SHBQ15464 509 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 KDM7AQ6ZMT4 941 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 ZNF574Q6ZN55 896 aaPredicted RBP16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 DHX40Q8IX18 779 aaKnown RBP16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 SNRNP27Q8WVK2 155 aaKnown RBP16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 MYLPFQ96A32 169 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 ASB7Q9H672 318 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 CRTAC1Q9NQ79 661 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 AGAP1Q9UPQ3 857 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 CLCA2Q9UQC9 943 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 SH3BP1Q9Y3L3 701 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 PCDHB1Q9Y5F3 818 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 CYP46A1Q9Y6A2 500 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 ABCA12Q86UK0 2595 aa16.38■□□□□ 0.21
CLSTN3-216ENST00000545663 ANKRD63C9JTQ0 380 aa16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 PAPSS1O43252 624 aaPredicted RBP16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 CACNG3O60359 315 aa16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 MPOP05164 745 aa16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 CDK4P11802 303 aa16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 POLR2BP30876 1174 aaKnown RBP16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 FXR2P51116 673 aaKnown RBP eCLIP16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 CACNA2D1P54289 1103 aa16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 NCKAP1LP55160 1127 aa16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 WNT7BP56706 349 aa16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 STARD3Q14849 445 aa16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 TPGS1Q6ZTW0 290 aa16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 C4orf32Q8N8J7 132 aa16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 PRCCQ92733 491 aaPredicted RBP16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 BHMTQ93088 406 aa16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 BIRC7Q96CA5 298 aa16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 P2RY11Q96G91 374 aa16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 BBS2Q9BXC9 721 aa16.37■□□□□ 0.21
CLSTN3-216ENST00000545663 CREBBPQ92793 2442 aa16.36■□□□□ 0.21
CLSTN3-216ENST00000545663 TLN1Q9Y490 2541 aaKnown RBP16.36■□□□□ 0.21
CLSTN3-216ENST00000545663 F8VP50 259 aa16.36■□□□□ 0.21
CLSTN3-216ENST00000545663 GABRDO14764 452 aa16.36■□□□□ 0.21
CLSTN3-216ENST00000545663 PPP3CCP48454 512 aa16.36■□□□□ 0.21
CLSTN3-216ENST00000545663 COPAP53621 1224 aa16.36■□□□□ 0.21
CLSTN3-216ENST00000545663 INSM1Q01101 510 aaPredicted RBP16.36■□□□□ 0.21
CLSTN3-216ENST00000545663 CYP27A1Q02318 531 aa16.36■□□□□ 0.21
CLSTN3-216ENST00000545663 VSTM1Q6UX27 236 aa16.36■□□□□ 0.21
CLSTN3-216ENST00000545663 ADGRF2Q8IZF7 708 aa16.36■□□□□ 0.21
CLSTN3-216ENST00000545663 DCBLD1Q8N8Z6 715 aa16.36■□□□□ 0.21
CLSTN3-216ENST00000545663 KCNE4Q8WWG9 221 aa16.36■□□□□ 0.21
CLSTN3-216ENST00000545663 WASF1Q92558 559 aa16.36■□□□□ 0.21
CLSTN3-216ENST00000545663 ZNF560Q96MR9 790 aa16.36■□□□□ 0.21
CLSTN3-216ENST00000545663 IKZF4Q9H2S9 585 aa16.36■□□□□ 0.21
CLSTN3-216ENST00000545663 OSGEPQ9NPF4 335 aa16.36■□□□□ 0.21
CLSTN3-216ENST00000545663 TMEM30AQ9NV96 361 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms